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L2_023_246G1_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_348_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(233..1633)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MF67_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15902.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_023_246G1_scaffold_348_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2125..4035
DNA (1911bp) protein (637aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
2-isopropylmalate synthase n=5 Tax=Bifidobacterium RepID=E3EQK6_BIFBS
leuA; 2-isopropylmalate synthase
L2_023_246G1_scaffold_348_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4204..6195)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLD6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22041.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
mrcA; penicillin-binding protein
L2_023_246G1_scaffold_348_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6227..6658)
DNA (432bp) protein (144aa)
Penicillin-binding protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKB8_BIFBI
mrcA; penicillin-binding protein
Penicillin-binding protein {ECO:0000313|EMBL:AFL05331.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_246G1_scaffold_348_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7116..8282)
DNA (1167bp) protein (389aa)
UDP-galactopyranose mutase n=4 Tax=Bifidobacterium RepID=E3EQK4_BIFBS
gif; UDP-galactopyranose mutase
UDP-galactopyranose mutase {ECO:0000313|EMBL:ADO53888.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_246G1_scaffold_348_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8492..9316)
DNA (825bp) protein (275aa)
Hemolysin III family related membrane protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G9E9_9BIFI
Hemolysin III family related membrane protein {ECO:0000313|EMBL:CDB22043.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hemolysin III
L2_023_246G1_scaffold_348_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9922..13989
DNA (4068bp) protein (1356aa)
Subtilisin family peptidase {ECO:0000313|EMBL:KFI44045.1}; EC=3.4.21.96 {ECO:0000313|EMBL:KFI44045.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
PA domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DMH0_BIFBI
vpr; minor extracellular protease
L2_023_246G1_scaffold_348_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14700..15830
DNA (1131bp) protein (377aa)
Putative pre-pilin peptidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKB4_BIFBI
putative pre-pilin peptidase
Putative pre-pilin peptidase {ECO:0000313|EMBL:AFL05327.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_246G1_scaffold_348_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15915..18818
DNA (2904bp) protein (968aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
topA; DNA topoisomerase (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLM7_9BIFI
L2_023_246G1_scaffold_348_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18899..19633
DNA (735bp) protein (245aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUF5_BIFBI
L2_023_246G1_scaffold_348_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19630..20814
DNA (1185bp) protein (395aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EFR50823.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFR50823.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
DNA polymerase III, delta' subunit n=3 Tax=Bifidobacterium bifidum RepID=E4VB58_BIFBI
holB; DNA polymerase III subunit delta'
L2_023_246G1_scaffold_348_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20825..21907)
DNA (1083bp) protein (361aa)
Transcriptional regulator, LacI family n=4 Tax=Bifidobacterium bifidum RepID=E4P030_BIFBP
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI44040.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_246G1_scaffold_348_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22069..22329)
DNA (261bp) protein (87aa)
Phosphocarrier protein HPr n=7 Tax=Bifidobacterium RepID=E3EQJ6_BIFBS
phosphocarrier protein HPr
Phosphocarrier protein Hpr {ECO:0000313|EMBL:EKF16381.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_246G1_scaffold_348_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22687..24345
DNA (1659bp) protein (553aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Phosphoenolpyruvate-protein phosphotransferase n=6 Tax=Bifidobacterium RepID=E3EQJ5_BIFBS
phosphoenolpyruvate-protein phosphotransferase
L2_023_246G1_scaffold_348_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24571..25170
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CFC9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82713.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
filamentation induced by cAMP protein Fi
L2_023_246G1_scaffold_348_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25543..26535)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DMG3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82712.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_246G1_scaffold_348_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26770..26946
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VB64_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50829.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
melB; putative symporter
L2_023_246G1_scaffold_348_18
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27187..28953
DNA (1767bp) protein (589aa)
Iron permease FTR1 n=3 Tax=Bifidobacterium RepID=E3EQJ0_BIFBS
Iron permease FTR1 {ECO:0000313|EMBL:CDB22454.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
iron permease FTR1
L2_023_246G1_scaffold_348_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28988..29671
DNA (684bp) protein (228aa)
Fe2+ high-affinity transport protein n=3 Tax=Bifidobacterium RepID=E3EQI9_BIFBS
Fe2+ high-affinity transport protein
Fe2+ high-affinity transport protein {ECO:0000313|EMBL:AFL05315.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_246G1_scaffold_348_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29777..31063
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CFC5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82708.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_246G1_scaffold_348_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31084..32385
DNA (1302bp) protein (434aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium bifidum RepID=E4P021_BIFBP
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:KFI44032.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_246G1_scaffold_348_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32418..33680
DNA (1263bp) protein (421aa)
Putative permease protein of ABC transportersystem n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M604_BIFBI
Putative permease protein of ABC transportersystem {ECO:0000313|EMBL:EKF16500.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
putative permease protein of ABC transportersystem
L2_023_246G1_scaffold_348_23
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33703..34509
DNA (807bp) protein (269aa)
ATP-binding protein of ABC transporter system n=5 Tax=Bifidobacterium RepID=E3EQI5_BIFBS
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:CDB22449.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_246G1_scaffold_348_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34502..35080
DNA (579bp) protein (193aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=R6GAJ2_9BIFI
putative lipo protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53868.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_246G1_scaffold_348_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35309..36016
DNA (708bp) protein (236aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VB72_BIFBI
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFR50837.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
yydK; putative HTH-type transcriptional regulator
L2_023_246G1_scaffold_348_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36321..36719
DNA (399bp) protein (133aa)
hydrolase (EC:5.2.1.8)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VB73_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50838.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_023_246G1_scaffold_348_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37005..38345
DNA (1341bp) protein (447aa)
PTS system cellobiose-specific transporter subunit IIC (EC:2.7.1.69)
PTS system, cellobiose-specific IIC component n=5 Tax=Bifidobacterium RepID=E3EQI1_BIFBS
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_246G1_scaffold_348_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38476..38775
DNA (300bp) protein (100aa)
chbB; N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component (EC:2.7.1.69)
N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component {ECO:0000313|EMBL:AFL05306.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AFL05306.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
N, N'-diacetylchitobiose-specificphospho transferase enzyme IIB component n=4 Tax=Bifidobacterium bifidum RepID=I3WK93_BIFBI
L2_023_246G1_scaffold_348_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38923..39252
DNA (330bp) protein (110aa)
PTS system, cellobiose-specific IIA component n=5 Tax=Bifidobacterium bifidum RepID=E3EQH9_BIFBS
licA; lichenan-specific phospho transferase enzyme IIA component
PTS system, cellobiose-specific IIA component {ECO:0000313|EMBL:ADO53863.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_246G1_scaffold_348_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39314..40747
DNA (1434bp) protein (478aa)
bglA; 6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=4 Tax=Bifidobacterium bifidum RepID=I3WK91_BIFBI
6-phospho-beta-glucosidase {ECO:0000313|EMBL:ERI82696.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying items 1-30 of 142 in total

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