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L2_023_246G1_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_364_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2047
DNA (2046bp) protein (682aa)
UvrABC system protein B n=2 Tax=Clostridium RepID=B6FJB8_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
excinuclease ABC, B subunit
L2_023_246G1_scaffold_364_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2055..4892
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJY8_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
excinuclease ABC, A subunit
L2_023_246G1_scaffold_364_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4997..5986
DNA (990bp) protein (330aa)
Cell shape determining protein, MreB/Mrl family n=2 Tax=Clostridium RepID=B6FJB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22271.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
rod shape-determining protein MreB
L2_023_246G1_scaffold_364_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6077..8287
DNA (2211bp) protein (737aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFA7_9CLOT
helicase, RecD/TraA family protein
L2_023_246G1_scaffold_364_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8348..9031
DNA (684bp) protein (228aa)
ComF family protein n=2 Tax=Clostridium RepID=B6FJB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22269.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted amidophosphoribosyltransferases
L2_023_246G1_scaffold_364_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9089..9484
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22268.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_364_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9485..10543
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83894.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_246G1_scaffold_364_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10576..11457
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22266.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
conserved hypothetical protein TIGR00159
L2_023_246G1_scaffold_364_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11435..12682
DNA (1248bp) protein (416aa)
YbbR-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJB0_9CLOT
YbbR-like protein {ECO:0000313|EMBL:EEA83892.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_246G1_scaffold_364_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12701..12964
DNA (264bp) protein (88aa)
Phosphocarrier, HPr family n=2 Tax=Clostridium RepID=B6FJA9_9CLOT
Phosphocarrier, HPr family {ECO:0000313|EMBL:EEA83891.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phosphotransferase System HPr (HPr) Family
L2_023_246G1_scaffold_364_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12975..13892
DNA (918bp) protein (306aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83890.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
dTDP-glucose pyrophosphorylase
L2_023_246G1_scaffold_364_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14129..14668
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22262.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Sporulation and spore germination.
L2_023_246G1_scaffold_364_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14701..17562
DNA (2862bp) protein (954aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22261.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cell wall hydrolase/autolysin
L2_023_246G1_scaffold_364_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17719..19659
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22260.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted nucleoside-diphosphate sugar epimerases
L2_023_246G1_scaffold_364_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19662..20864
DNA (1203bp) protein (401aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=2 Tax=Clostridium RepID=B6FJA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22259.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
L2_023_246G1_scaffold_364_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20879..21559
DNA (681bp) protein (227aa)
Bacterial sugar transferase n=2 Tax=Clostridium RepID=B6FJA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22258.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Sugar transferases involved in lipopolysaccharide synthesis
L2_023_246G1_scaffold_364_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21578..22825
DNA (1248bp) protein (416aa)
Glycosyltransferase, group 1 family protein n=2 Tax=Clostridium RepID=B6FJA1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22257.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_364_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22825..23937
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22256.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_364_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23934..25049
DNA (1116bp) protein (372aa)
Glycosyltransferase, group 1 family protein n=2 Tax=Clostridium RepID=B6FJ99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22255.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_364_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25062..26375
DNA (1314bp) protein (438aa)
Nucleotide sugar dehydrogenase n=2 Tax=Clostridium RepID=B6FJ98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22254.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_364_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26387..27466
DNA (1080bp) protein (360aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EEA83879.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EEA83879.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Clostridium RepID=B6FJ97_9CLOT
hypothetical protein
L2_023_246G1_scaffold_364_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27486..28559
DNA (1074bp) protein (358aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Clostridium RepID=B6FJ94_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEA83876.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_246G1_scaffold_364_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28561..29136
DNA (576bp) protein (192aa)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Clostridium RepID=B6FJ93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22249.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetyltransferase
L2_023_246G1_scaffold_364_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29140..30276
DNA (1137bp) protein (379aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=2 Tax=Clostridium RepID=B6FJ92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22248.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
aminotransferase DegT
L2_023_246G1_scaffold_364_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30288..31391
DNA (1104bp) protein (368aa)
Leucine rich repeat protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0M6_9FIRM
Leucine rich repeat protein {ECO:0000313|EMBL:CDC14249.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative internalin
L2_023_246G1_scaffold_364_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31403..32782
DNA (1380bp) protein (460aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSQ8_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC14250.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_023_246G1_scaffold_364_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32767..34044
DNA (1278bp) protein (426aa)
Polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6W0_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC14251.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative membrane protein
L2_023_246G1_scaffold_364_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34124..35134
DNA (1011bp) protein (337aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridium RepID=B6FJ89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22246.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_023_246G1_scaffold_364_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35157..36665
DNA (1509bp) protein (503aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22244.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_364_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36842..37939
DNA (1098bp) protein (366aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=R6QJW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22242.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glycosyl transferase family 1
Displaying items 1-30 of 85 in total

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