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L2_023_246G1_scaffold_379

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_379_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(192..1922)
DNA (1731bp) protein (577aa)
Na+/H+ antiporter family protein n=6 Tax=Clostridium difficile RepID=D5Q6X1_CLODI
Na+/H+ antiporter
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EQI84848.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_023_246G1_scaffold_379_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2406..3392
DNA (987bp) protein (329aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
lipoate-protein ligase (EC:2.7.7.63)
Lipoyltransferase and lipoate-ligase family protein n=7 Tax=Clostridium difficile RepID=T2VXH2_CLODI
L2_023_246G1_scaffold_379_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3702..4499
DNA (798bp) protein (266aa)
Lipoprotein n=7 Tax=Clostridium difficile RepID=T2VXH8_CLODI
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
lipoprotein
L2_023_246G1_scaffold_379_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4602..5201
DNA (600bp) protein (200aa)
Uncharacterized protein n=160 Tax=Clostridium difficile RepID=G6BY34_CLODI
putative tellurium resistance protein
Tellurium resistance family protein {ECO:0000313|EMBL:EQE65691.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_379_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5493..7352)
DNA (1860bp) protein (620aa)
Diguanylate cyclase domain protein n=7 Tax=Clostridium difficile RepID=T2VYL8_CLODI
Putative signaling protein {ECO:0000313|EMBL:CDS86912.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative signaling protein
L2_023_246G1_scaffold_379_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7840..8805)
DNA (966bp) protein (322aa)
Uncharacterized protein n=74 Tax=Clostridium difficile RepID=T2VA52_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99320.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
iron compound ABC transporter substrate-binding protein
L2_023_246G1_scaffold_379_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8897..9652)
DNA (756bp) protein (252aa)
ABC transporter family protein n=62 Tax=Clostridium difficile RepID=C9XQL4_CLODC
iron compound ABC transporter ATP-binding protein
Putative iron compound ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBE04187.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_246G1_scaffold_379_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9649..10605)
DNA (957bp) protein (319aa)
FecCD transport family protein n=66 Tax=Clostridium difficile RepID=T2UX48_CLODI
ABC-type transport system, iron-family permease
FecCD transport family protein {ECO:0000313|EMBL:EQH99318.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_023_246G1_scaffold_379_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10595..11548)
DNA (954bp) protein (318aa)
FecCD transport family protein n=137 Tax=Clostridium difficile RepID=T3H7W5_CLODC
ABC-type transport system, iron-family permease
ABC-type transport system, iron-family permease {ECO:0000313|EMBL:CCL21801.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_023_246G1_scaffold_379_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11796..12776)
DNA (981bp) protein (327aa)
Putative peptidase, M19 family {ECO:0000313|EMBL:CDS86903.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CDS86903.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Membrane dipeptidase family protein n=6 Tax=Clostridium difficile RepID=T3HZD9_CLODI
dipeptidase
L2_023_246G1_scaffold_379_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12852..14054)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=T3H4Y6_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65732.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_379_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14250..14804
DNA (555bp) protein (185aa)
Cupin domain protein n=114 Tax=Clostridium difficile RepID=G6BB90_CLODI
transcriptional regulator
Cupin domain protein {ECO:0000313|EMBL:EHJ24960.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_023_246G1_scaffold_379_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14919..15710)
DNA (792bp) protein (264aa)
Haloacid dehalogenase-like hydrolase family protein n=88 Tax=Clostridium difficile RepID=T2U1B7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL21797.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L2_023_246G1_scaffold_379_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15738..16826)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=77 Tax=Clostridium difficile RepID=G6BY44_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE65706.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L2_023_246G1_scaffold_379_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16880..18118)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T3HZD4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87225.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_246G1_scaffold_379_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18096..19172)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=47 Tax=Clostridium difficile RepID=T3H6H7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65714.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_379_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19236..20372)
DNA (1137bp) protein (379aa)
Toxic anion resistance protein TelA n=210 Tax=Clostridium difficile RepID=G6BB85_CLODI
tellurite resistance protein
Toxic anion resistance family protein {ECO:0000313|EMBL:EQE65723.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_379_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20373..21935)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=20 Tax=Clostridium difficile RepID=T2VYK6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE65720.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
conserved hypothetical protein
L2_023_246G1_scaffold_379_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22022..24781)
DNA (2760bp) protein (920aa)
Calcium-transporting ATPase {ECO:0000313|EMBL:CKH08931.1}; EC=3.6.3.8 {ECO:0000313|EMBL:CKH08931.1};; Putative calcium-transporting ATPase {ECO:0000313|EMBL:CEJ98229.1}; EC=3.6.3.8 {ECO:0000313|EMBL:CEJ98229.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Calcium-translocating P-type ATPase, PMCA-type n=94 Tax=Clostridium difficile RepID=T3H9S7_CLODC
calcium-transporting ATPase
L2_023_246G1_scaffold_379_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24771..25400)
DNA (630bp) protein (210aa)
Stress response protein SCP2 n=203 Tax=Clostridium difficile RepID=C9XQD6_CLODC
tellurium resistance protein
Bacterial stress protein {ECO:0000313|EMBL:EHJ26353.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_023_246G1_scaffold_379_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25486..26064)
DNA (579bp) protein (193aa)
Bacterial stress family protein n=187 Tax=Clostridium difficile RepID=T3H6H3_CLODC
terD; Tellurium resistance protein
Tellurium resistance protein {ECO:0000313|EMBL:CCL21789.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_023_246G1_scaffold_379_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26103..26681)
DNA (579bp) protein (193aa)
General stress protein 16U n=216 Tax=Clostridium difficile RepID=C9XQD4_CLODC
tellurium resistance protein
Bacterial stress protein {ECO:0000313|EMBL:EFH06347.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L2_023_246G1_scaffold_379_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27010..28446
DNA (1437bp) protein (479aa)
Trypsin family protein n=7 Tax=Clostridium difficile RepID=T2VVY8_CLODI
Putative serine protease {ECO:0000313|EMBL:CDS86878.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative serine protease
L2_023_246G1_scaffold_379_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28538..30412)
DNA (1875bp) protein (625aa)
asnB; asparagine synthetase (EC:6.3.5.4)
Asparagine synthetase {ECO:0000313|EMBL:CAJ68497.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CAJ68497.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Asparagine synthetase n=166 Tax=Clostridium difficile RepID=T3HAC6_CLODC
L2_023_246G1_scaffold_379_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30585..31289
DNA (705bp) protein (235aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Superoxide dismutase n=190 Tax=Clostridium difficile RepID=C9XQ61_CLODC
sodA; superoxide dismutase
L2_023_246G1_scaffold_379_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31369..31938
DNA (570bp) protein (190aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=T2VXL1_CLODI
membrane-associated metal-dependent hydrolase
Putative membrane-associated metal-dependent hydrolase {ECO:0000313|EMBL:CBE04153.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_246G1_scaffold_379_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32104..32724)
DNA (621bp) protein (207aa)
Uncharacterized protein n=194 Tax=Clostridium difficile RepID=Q186I5_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE65707.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_379_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33038..35176)
DNA (2139bp) protein (713aa)
Alanine racemase 1 {ECO:0000313|EMBL:CDS87200.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CDS87200.1};; Amino-acid racemase {ECO:0000313|EMBL:CDS86868.1}; EC=5.1.1.- {ECO:0000313|EMBL:CDS86868.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Alanine racemase n=7 Tax=Clostridium difficile RepID=T2VWT0_CLODI
serine/alanine racemase
L2_023_246G1_scaffold_379_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35194..36000)
DNA (807bp) protein (269aa)
D-alanyl-D-alanine carboxypeptidase n=195 Tax=Clostridium difficile RepID=Q186I1_CLOD6
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EQH99297.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_023_246G1_scaffold_379_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35997..37097)
DNA (1101bp) protein (367aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
D-alanine--D-alanine ligase n=74 Tax=Clostridium difficile RepID=T2VBW1_CLODI
vanG; vancomycin/teicoplanin A-type resistance protein
Displaying items 1-30 of 41 in total

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