ggKbase home page

L2_023_246G1_scaffold_380

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_380_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(232..3099)
DNA (2868bp) protein (956aa)
DNA polymerase I {ECO:0000313|EMBL:CBK70717.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBK70717.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
DNA polymerase I n=3 Tax=Bifidobacterium longum RepID=B3DSR5_BIFLD
polA; DNA polymerase I
L2_023_246G1_scaffold_380_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3145..3930)
DNA (786bp) protein (262aa)
AmiR n=14 Tax=Bifidobacterium RepID=E4QZD4_BIFLM
amiR; response regulator
Two-component response regulator {ECO:0000313|EMBL:BAP83332.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_023_246G1_scaffold_380_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4332..5696
DNA (1365bp) protein (455aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GTY5_BIFLN
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEI81365.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
phage integrase family protein
L2_023_246G1_scaffold_380_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5721..6803)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYM7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ24220.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_023_246G1_scaffold_380_5
unknown

Not on your lists

6920..7099
DNA (180bp) protein (60aa)

This feature has no annotations

L2_023_246G1_scaffold_380_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7044..7670
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97628.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_023_246G1_scaffold_380_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7774..8220
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VS43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35580.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_023_246G1_scaffold_380_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8316..8501
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5NET6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95881.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_023_246G1_scaffold_380_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8697..8993)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C2GTY8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY21992.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_023_246G1_scaffold_380_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8984..9301)
DNA (318bp) protein (106aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYM3_BIFLN
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EIJ24216.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L2_023_246G1_scaffold_380_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9267..10127)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYM5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ24218.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_023_246G1_scaffold_380_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10232..11668
DNA (1437bp) protein (479aa)
TraG-like protein (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFF6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95887.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_023_246G1_scaffold_380_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11912..12574
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTZ2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81348.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_023_246G1_scaffold_380_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12644..12982
DNA (339bp) protein (113aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=C2GTZ3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCY95889.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_023_246G1_scaffold_380_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13073..14518
DNA (1446bp) protein (482aa)
TrbL/VirB6 plasmid conjugal transfer domain protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AYN1_BIFLN
TrbL/VirB6 plasmid conjugal transfer domain protein {ECO:0000313|EMBL:EIJ24224.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L2_023_246G1_scaffold_380_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14603..16072
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTZ5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81340.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_023_246G1_scaffold_380_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16075..16872
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA97_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54941.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_023_246G1_scaffold_380_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16948..17256
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTZ7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81342.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Hypothetical protein
L2_023_246G1_scaffold_380_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17253..17417
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA96_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54940.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_023_246G1_scaffold_380_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18352..18648
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3B3W3_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY21983.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_246G1_scaffold_380_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18662..19006)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA93_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54937.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_023_246G1_scaffold_380_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19306..20199
DNA (894bp) protein (298aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3B3V7_BIFLN
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EIJ26050.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
D12 class N6 adenine-specific DNA methyltransferase
L2_023_246G1_scaffold_380_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20215..21615
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GU02_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81337.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_023_246G1_scaffold_380_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21938..22936
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3B3W1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ26054.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
abortive infection protein
L2_023_246G1_scaffold_380_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22933..23931
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3B3V6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ26049.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Hypothetical protein
L2_023_246G1_scaffold_380_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24142..28185
DNA (4044bp) protein (1348aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GU07_BIFLN
Phage tail protein {ECO:0000313|EMBL:KEY32708.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L2_023_246G1_scaffold_380_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28355..30190
DNA (1836bp) protein (612aa)
Cna protein B-type domain protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GU08_BIFLN
Cna protein B-type domain protein {ECO:0000313|EMBL:EEI81289.1}; Flags: Fragment;; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_023_246G1_scaffold_380_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30364..38085
DNA (7722bp) protein (2574aa)
Repeat protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA86_BIFLI
Repeat protein {ECO:0000313|EMBL:EEQ54930.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_023_246G1_scaffold_380_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38082..39059
DNA (978bp) protein (326aa)
Sortase family protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA85_BIFLI
Sortase family protein {ECO:0000313|EMBL:EEQ54929.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
sortase
L2_023_246G1_scaffold_380_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39081..42116
DNA (3036bp) protein (1012aa)
SCP-like protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EA84_BIFLI
SCP-like protein {ECO:0000313|EMBL:EEQ54928.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
cell surface protein
Displaying items 1-30 of 51 in total

View Taxonomy