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L2_023_246G1_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_457_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..381)
DNA (381bp) protein (127aa)
ParB-like partition protein n=2 Tax=Clostridiales RepID=G9RSR7_9FIRM
Plasmid stablization protein ParB {ECO:0000313|EMBL:KJF39169.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
parB-like partition protein
L2_023_246G1_scaffold_457_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(338..1159)
DNA (822bp) protein (274aa)
Chromosome partitioning protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0BUG3_9CLOT
Chromosome partitioning protein {ECO:0000313|EMBL:ENZ47892.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
ATPases involved in chromosome partitioning
L2_023_246G1_scaffold_457_3

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comp(1610..2473)
DNA (864bp) protein (288aa)
ParB-like partition protein n=1 Tax=gut metagenome RepID=J9GXF5_9ZZZZ
ParB-like partition protein {ECO:0000313|EMBL:EJX05410.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
ParB family protein
L2_023_246G1_scaffold_457_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2789..5422)
DNA (2634bp) protein (878aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LQZ5_9FIRM
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EOS61200.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L2_023_246G1_scaffold_457_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(5755..7236)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AV31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45834.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L2_023_246G1_scaffold_457_6
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(7229..7771)
DNA (543bp) protein (181aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWD8_9FIRM
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CCX72203.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L2_023_246G1_scaffold_457_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7919..9121)
DNA (1203bp) protein (401aa)
Elongation factor Tu n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L7_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tuf; elongation factor Tu
L2_023_246G1_scaffold_457_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9250..11367)
DNA (2118bp) protein (706aa)
Elongation factor G n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L8_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
fusA; elongation factor G
L2_023_246G1_scaffold_457_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11386..11907)
DNA (522bp) protein (174aa)
30S ribosomal protein S7 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L9_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsG; 30S ribosomal protein S7
L2_023_246G1_scaffold_457_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12040..12462)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M0_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsL; 30S ribosomal protein S12
L2_023_246G1_scaffold_457_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12564..12803)
DNA (240bp) protein (80aa)
Large subunit ribosomal protein L7A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M1_9FIRM
Large subunit ribosomal protein L7A {ECO:0000313|EMBL:EGJ48347.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ribosomal protein L7Ae-like protein
L2_023_246G1_scaffold_457_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

13159..14409
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15117.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_023_246G1_scaffold_457_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14567..14755
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48348.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
4Fe-4S ferredoxin
L2_023_246G1_scaffold_457_14
unknown

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comp(14906..15001)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_023_246G1_scaffold_457_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15475..16851)
DNA (1377bp) protein (459aa)
serine protease (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46454.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_023_246G1_scaffold_457_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17066..18223)
DNA (1158bp) protein (386aa)
Sporulation integral membrane protein YtvI n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF3_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EGJ46453.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sporulation integral membrane protein YtvI
L2_023_246G1_scaffold_457_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18332..19201)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46452.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
EDD domain protein, DegV family
L2_023_246G1_scaffold_457_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19285..19494)
DNA (210bp) protein (70aa)
UPF0291 protein HMPREF0866_01471 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF1_9FIRM
UPF0291 protein HMPREF0866_01471 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_457_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19539..20336)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46363.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_457_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20608..21183
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46486.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
TetR family transcriptional regulator
L2_023_246G1_scaffold_457_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21199..23658
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46485.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_457_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23645..26833
DNA (3189bp) protein (1063aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46484.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_023_246G1_scaffold_457_23
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26896..27444)
DNA (549bp) protein (183aa)
Nitroreductase n=1 Tax=Clostridium sp. CAG:590 RepID=R5E4J2_9CLOT
Nitroreductase {ECO:0000313|EMBL:CCX87413.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Nitroreductase
L2_023_246G1_scaffold_457_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27562..28893)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46474.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MatE efflux family protein
L2_023_246G1_scaffold_457_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28890..29372)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46475.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MarR family transcripitonal regulator
L2_023_246G1_scaffold_457_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29715..31628)
DNA (1914bp) protein (638aa)
Chaperone protein HtpG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEN0_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
htpG; chaperone protein HtpG
L2_023_246G1_scaffold_457_27
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

31878..32237
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14922.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Predicted transcriptional regulators
L2_023_246G1_scaffold_457_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

32234..32959
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14923.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ABC transporter
L2_023_246G1_scaffold_457_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

32959..33738
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14924.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ABC transporter permease
L2_023_246G1_scaffold_457_30
unknown

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33768..34046
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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