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L2_023_246G1_scaffold_499

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_499_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..141
DNA (141bp) protein (47aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CCL31389.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CCL31389.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Aryl-phospho-beta-D-glucosidase BglH n=9 Tax=Clostridium difficile RepID=T3M031_CLODI
6-phospho-beta-glucosidase
L2_023_246G1_scaffold_499_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81..773)
DNA (693bp) protein (231aa)
bglA6; 6-phospho-beta-glucosidase, bglA6 (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:EQE59780.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EQE59780.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Cellulase family protein n=43 Tax=Clostridium difficile RepID=T2UVJ0_CLODI
L2_023_246G1_scaffold_499_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1178..2065)
DNA (888bp) protein (296aa)
Cupin domain protein n=69 Tax=Clostridium difficile RepID=T2TAI7_CLODI
Cupin domain protein {ECO:0000313|EMBL:EQG74439.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
AraC family transcriptional regulator
L2_023_246G1_scaffold_499_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2165..2614)
DNA (450bp) protein (150aa)
PTS system, fructose subfamily, IIA component domain protein n=55 Tax=Clostridium difficile RepID=T3G521_CLODC
PTS system fructose-like transporter subunit IIA
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EHJ34379.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_023_246G1_scaffold_499_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2604..4511)
DNA (1908bp) protein (636aa)
PRD domain protein n=6 Tax=Clostridium difficile RepID=T3HHE2_CLODI
PRD domain protein {ECO:0000313|EMBL:CDS89682.1}; Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CDS89057.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PTS operon transcription antiterminator
L2_023_246G1_scaffold_499_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4779..6674)
DNA (1896bp) protein (632aa)
PTS system fructose-specific EIIABC component {ECO:0000313|EMBL:CDS89684.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDS89684.1};; EC=2.7.1.69 {ECO:0000313|EMBL:CDS89684.1};; PTS system, fructose-like IIABC component {ECO:0000313|EMBL:CDS89059.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS89059.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PTS system, fructose-like IIABC component (EC:2.7.1.69)
PTS system, fructose subfamily, IIA component domain protein n=7 Tax=Clostridium difficile RepID=T3HER5_CLODI
L2_023_246G1_scaffold_499_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6710..7588)
DNA (879bp) protein (293aa)
Ketose-bisphosphate aldolase family protein n=22 Tax=Clostridium difficile RepID=T2TCJ9_CLODI
Ketose-bisphosphate aldolase family protein {ECO:0000313|EMBL:EQG74147.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L2_023_246G1_scaffold_499_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8290..9723)
DNA (1434bp) protein (478aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CDT60688.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDT60688.1};; Aryl-6-phospho-beta-glucosidase {ECO:0000313|EMBL:CDS89688.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDS89688.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
bglA; 6-phospho-beta-glucosidase (EC:3.2.1.86)
Putative phospho-beta-glucosidase n=7 Tax=Clostridium difficile RepID=T2VKC6_CLODI
L2_023_246G1_scaffold_499_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9746..11587)
DNA (1842bp) protein (614aa)
PTS system, beta-glucoside-specific IIABC component {ECO:0000313|EMBL:CDS89690.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS89690.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
bglF5; PTS system, beta-glucoside-specific IIABCcomponent, bglF5 (EC:2.7.1.69)
PTS system, beta-glucoside-specific IIABC component family protein n=11 Tax=Clostridium difficile RepID=T2VJ59_CLODI
L2_023_246G1_scaffold_499_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11713..12546)
DNA (834bp) protein (278aa)
PRD domain protein n=70 Tax=Clostridium difficile RepID=T3GA12_CLODC
bglG4; Transcription antiterminator, PTS operonregulator, bglG4
PRD domain protein {ECO:0000313|EMBL:EQE59809.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_499_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13590..13790)
DNA (201bp) protein (67aa)
Helix-turn-helix family protein n=183 Tax=Clostridium difficile RepID=T3G4W5_CLODC
transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:EQI76599.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_023_246G1_scaffold_499_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13803..14219)
DNA (417bp) protein (139aa)
Uncharacterized protein n=149 Tax=Clostridium difficile RepID=G6BYV5_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:EQG74443.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_246G1_scaffold_499_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14287..14700)
DNA (414bp) protein (138aa)
Putative membrane protein n=7 Tax=Clostridium difficile RepID=T2VJU1_CLODI
Putative membrane protein {ECO:0000313|EMBL:CDS89077.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS89697.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative membrane protein
L2_023_246G1_scaffold_499_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15533..16162)
DNA (630bp) protein (210aa)
DJ-1/PfpI family protein n=7 Tax=Clostridium difficile RepID=T2VMS0_CLODI
Putative ThiJ/pfpI family protein {ECO:0000313|EMBL:CDS89079.1}; Putative factor of the oxidative stress response {ECO:0000313|EMBL:CDS89698.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ThiJ/pfpI family protein
L2_023_246G1_scaffold_499_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16241..17203)
DNA (963bp) protein (321aa)
Transcriptional regulator family protein n=7 Tax=Clostridium difficile RepID=T2VK70_CLODI
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CDT60557.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcriptional regulator, DeoR family
L2_023_246G1_scaffold_499_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17965..21408)
DNA (3444bp) protein (1148aa)
Putative serine-aspartate repeat-containing protein SdrF n=3 Tax=Clostridium difficile RepID=T4WZF8_CLODI
Putative serine-aspartate repeat-containing protein SdrF {ECO:0000313|EMBL:CDS89085.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cbpA; putative serine-aspartate repeat-containingprotein SdrF
L2_023_246G1_scaffold_499_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21705..22259
DNA (555bp) protein (185aa)
Sortase family protein n=7 Tax=Clostridium difficile RepID=T2VJP8_CLODI
Sortase B (Modular protein) {ECO:0000313|EMBL:CDS89087.1}; Sortase, SrtB family {ECO:0000313|EMBL:CDS89701.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative peptidase C60B, sortase B
L2_023_246G1_scaffold_499_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22491..22592
DNA (102bp) protein (34aa)
Uncharacterised protein {ECO:0000313|EMBL:CKG82530.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_246G1_scaffold_499_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23258..24883)
DNA (1626bp) protein (542aa)
Cytosine-specific methyltransferase n=87 Tax=Clostridium difficile RepID=Q184Y5_CLOD6
putative DNA-methyltransferase
Putative DNA-methyltransferase {ECO:0000313|EMBL:CAJ70040.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_023_246G1_scaffold_499_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25195..27813
DNA (2619bp) protein (873aa)
Uncharacterized protein n=85 Tax=Clostridium difficile RepID=Q184Y4_CLOD6
Uncharacterized protein {ECO:0000313|EMBL:CAJ70041.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Hypothetical protein
L2_023_246G1_scaffold_499_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27831..31358
DNA (3528bp) protein (1176aa)
Helicase conserved C-terminal domain protein n=81 Tax=Clostridium difficile RepID=T3G6S2_CLODC
DNA helicase {ECO:0000313|EMBL:CAJ70042.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
DNA helicase
L2_023_246G1_scaffold_499_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31360..33273
DNA (1914bp) protein (638aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2VJI5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS92929.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_023_246G1_scaffold_499_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33968..34711)
DNA (744bp) protein (248aa)
Putative phage protein n=7 Tax=Clostridium difficile RepID=T2VJ74_CLODI
Putative phage protein {ECO:0000313|EMBL:CDS89098.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS89710.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative phage protein
L2_023_246G1_scaffold_499_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34733..35047)
DNA (315bp) protein (105aa)
Excisionase from transposon Tn916 family protein n=104 Tax=Clostridium difficile RepID=C9XR66_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG82368.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS92926.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_246G1_scaffold_499_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35051..35251)
DNA (201bp) protein (67aa)
Helix-turn-helix family protein n=96 Tax=Clostridium difficile RepID=T3G4Z0_CLODC
Transcriptional regulator, Phage-type
Helix-turn-helix family protein {ECO:0000313|EMBL:EQE59798.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_246G1_scaffold_499_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35398..36162
DNA (765bp) protein (255aa)
Helix-turn-helix family protein n=16 Tax=Clostridium difficile RepID=T2VK45_CLODI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDS89715.1}; Transcriptional regulator, Phage-type {ECO:0000313|EMBL:CDS89104.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
phage DNA-binding protein
L2_023_246G1_scaffold_499_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36219..36416
DNA (198bp) protein (66aa)
Putative phage domain protein n=6 Tax=Clostridium difficile RepID=T2VJD5_CLODI
Putative phage protein {ECO:0000313|EMBL:CDS92920.1}; Toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:CDS89716.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_246G1_scaffold_499_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36413..36904
DNA (492bp) protein (164aa)
Helix-turn-helix family protein n=7 Tax=Clostridium difficile RepID=T3HEN5_CLODI
Transcriptional regulator, Phage-type {ECO:0000313|EMBL:CDS89107.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcriptional regulator, Phage-type
L2_023_246G1_scaffold_499_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36993..37745
DNA (753bp) protein (251aa)
Fic/DOC family protein n=7 Tax=Clostridium difficile RepID=T2VJQ3_CLODI
Putative Fic/Doc-related protein {ECO:0000313|EMBL:CDS89109.1}; Toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:CDS89720.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Fic/Doc-related protein
L2_023_246G1_scaffold_499_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37735..38901
DNA (1167bp) protein (389aa)
Phage integrase family protein n=7 Tax=Clostridium difficile RepID=T2VKD4_CLODI
Phage integrase {ECO:0000313|EMBL:CDS89112.1}; Tyrosine recombinase XerC-like {ECO:0000313|EMBL:CDS89721.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
phage integrase
Displaying items 1-30 of 34 in total

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