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L2_023_246G1_scaffold_531

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_531_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(449..1648)
DNA (1200bp) protein (400aa)
Metal ion transporter metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLF8_9FIRM
Metal ion transporter metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:CCZ66528.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transporter
L2_023_246G1_scaffold_531_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1681..2646
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BL45_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15854.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, LacI family
L2_023_246G1_scaffold_531_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2703..3725)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BM35_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN42558.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_023_246G1_scaffold_531_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3785..4225)
DNA (441bp) protein (147aa)
Hsp20/alpha crystallin family protein n=4 Tax=Clostridiales RepID=A7B048_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15856.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
heat shock protein Hsp20
L2_023_246G1_scaffold_531_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4376..5227)
DNA (852bp) protein (284aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M411_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL25973.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_023_246G1_scaffold_531_6
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5268..6602)
DNA (1335bp) protein (445aa)
Putative efflux protein, MATE family n=1 Tax=Coprococcus catus GD/7 RepID=D4JBK2_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK81723.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_023_246G1_scaffold_531_7
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6920..7582)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6ERH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99769.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
transposase IS4 family protein
L2_023_246G1_scaffold_531_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7599..8027)
DNA (429bp) protein (143aa)
recombinase XerC n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FBAF83
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77339.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_023_246G1_scaffold_531_9
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8042..10483)
DNA (2442bp) protein (814aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y300_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58581.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_023_246G1_scaffold_531_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10566..11414)
DNA (849bp) protein (283aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U5Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44348.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_023_246G1_scaffold_531_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11414..12370)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UCB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66537.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_023_246G1_scaffold_531_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12461..13840)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TLG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44350.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_531_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13982..14722
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66539.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L2_023_246G1_scaffold_531_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14827..17526)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66540.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_023_246G1_scaffold_531_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17549..19963)
DNA (2415bp) protein (805aa)
chitobiose phosphorylase (EC:2.4.1.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BM71_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15872.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_023_246G1_scaffold_531_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20354..20767)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BL56_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44345.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_531_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21158..21724
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B023_RUMGN
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_023_246G1_scaffold_531_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21795..24125)
DNA (2331bp) protein (777aa)
Ferrous iron transporter B n=3 Tax=Clostridiales RepID=F7K0Z0_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:ETD15876.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ferrous iron transporter FeoB
L2_023_246G1_scaffold_531_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24244..26001)
DNA (1758bp) protein (586aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Lachnospiraceae RepID=V8BM78_RUMGN
L2_023_246G1_scaffold_531_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26223..26675)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B020_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15878.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Protein of unknown function (DUF1653).
L2_023_246G1_scaffold_531_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26693..26938)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B019_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78732.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_023_246G1_scaffold_531_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26951..27223)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B018_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78731.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_023_246G1_scaffold_531_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27324..27458)
DNA (135bp) protein (45aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TLK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44362.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_023_246G1_scaffold_531_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27592..28242)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Putative ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B016_RUMGN
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EDN78729.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_023_246G1_scaffold_531_25
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28256..29623)
DNA (1368bp) protein (456aa)
TRAP transporter, DctM subunit n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LAL8_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EET62625.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TRAP dicarboxylate transporter, DctM subunit
L2_023_246G1_scaffold_531_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29929..30804)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B013_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78726.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_023_246G1_scaffold_531_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30813..32099)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDN78725.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDN78725.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B012_RUMGN
L2_023_246G1_scaffold_531_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32125..32604)
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B011_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44368.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_531_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32640..33548)
DNA (909bp) protein (303aa)
ParB-like protein n=2 Tax=Clostridiales RepID=A7B010_RUMGN
ParB-like protein {ECO:0000313|EMBL:EDN78723.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ParB-like partition proteins
L2_023_246G1_scaffold_531_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33550..34317)
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=4 Tax=Clostridiales RepID=A7B009_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44370.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPases involved in chromosome partitioning
Displaying items 1-30 of 52 in total

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