ggKbase home page

L2_023_246G1_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_540_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..496
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ACX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79667.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Viral replication-associated protein
L2_023_246G1_scaffold_540_2
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

489..806
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XDF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06461.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L2_023_246G1_scaffold_540_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

919..2169
DNA (1251bp) protein (417aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. D5 RepID=F0YTE5_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EGB94165.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
integrase family protein
L2_023_246G1_scaffold_540_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2318..3184
DNA (867bp) protein (289aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B262_RUMGN
L2_023_246G1_scaffold_540_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3212..3385
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B7T0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46169.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_540_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3564..3830
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30961.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Antitoxin of toxin-antitoxin stability system
L2_023_246G1_scaffold_540_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3823..4077
DNA (255bp) protein (85aa)
Txe/YoeB family addiction module toxin n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKZ1_9FIRM
Txe/YoeB family addiction module toxin {ECO:0000313|EMBL:EGN30962.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
toxin-antitoxin system, toxin component, Txe/YoeB family
L2_023_246G1_scaffold_540_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4125..4451)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B263_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78335.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_023_246G1_scaffold_540_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4815..6191)
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B264_RUMGN
MATE efflux family protein {ECO:0000313|EMBL:EDN78336.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Na+-driven multidrug efflux pump
L2_023_246G1_scaffold_540_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6340..7302
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRK4_9FIRM
L2_023_246G1_scaffold_540_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7320..7544
DNA (225bp) protein (75aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=A7B269_RUMGN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L2_023_246G1_scaffold_540_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7561..8499
DNA (939bp) protein (313aa)
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EDN78342.1}; EC=1.3.-.- {ECO:0000313|EMBL:EDN78342.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Enoyl-(Acyl-carrier-protein) reductase II n=4 Tax=Clostridiales RepID=F7JYG7_9FIRM
L2_023_246G1_scaffold_540_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8492..9412
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Clostridiales RepID=A7B271_RUMGN
L2_023_246G1_scaffold_540_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9406..10146
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=3 Tax=Clostridiales RepID=F7JYG6_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CCZ68437.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_023_246G1_scaffold_540_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10161..11399
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Clostridiales RepID=A7B273_RUMGN
L2_023_246G1_scaffold_540_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11410..11835
DNA (426bp) protein (142aa)
Acetyl-CoA carboxylase n=4 Tax=Clostridiales RepID=F7JYG5_9FIRM
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ETD19314.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L2_023_246G1_scaffold_540_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11849..12280
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridiales RepID=A7B275_RUMGN
L2_023_246G1_scaffold_540_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12283..13626
DNA (1344bp) protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Biotin carboxylase n=4 Tax=Clostridiales RepID=A7B276_RUMGN
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46925.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_023_246G1_scaffold_540_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13642..15330
DNA (1689bp) protein (563aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI23_9FIRM
L2_023_246G1_scaffold_540_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15363..16415
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68443.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Dioxygenases related to 2-nitropropane dioxygenase
L2_023_246G1_scaffold_540_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16458..16919
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B279_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68444.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, MarR family
L2_023_246G1_scaffold_540_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16958..17608
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TRU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68445.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_023_246G1_scaffold_540_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17884..18771
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68446.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_023_246G1_scaffold_540_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18797..19822)
DNA (1026bp) protein (342aa)
Transcriptional regulators (EC:5.1.1.1)
Putative DNA-binding transcriptional regulator CytR n=2 Tax=Clostridiales RepID=A7B284_RUMGN
Putative DNA-binding transcriptional regulator CytR {ECO:0000313|EMBL:CCZ68447.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_023_246G1_scaffold_540_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20001..20111
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68448.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_023_246G1_scaffold_540_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20134..20334
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68449.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
pullulanase, type I
L2_023_246G1_scaffold_540_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20341..22284
DNA (1944bp) protein (648aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BXS7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46913.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycogen debranching protein
L2_023_246G1_scaffold_540_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22312..24573
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphorylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UBB7_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L2_023_246G1_scaffold_540_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24604..26073
DNA (1470bp) protein (490aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI34_9FIRM
L2_023_246G1_scaffold_540_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26086..27840
DNA (1755bp) protein (585aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B294_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46909.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycosidase
Displaying items 1-30 of 41 in total

View Taxonomy