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L2_023_246G1_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_576_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..668)
DNA (666bp) protein (222aa)
Putative transcriptional regulator, AraC family n=1 Tax=Clostridium sp. D5 RepID=F0Z448_9CLOT
Putative transcriptional regulator, AraC family {ECO:0000313|EMBL:EGB91161.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
transcriptional regulator, AraC family
L2_023_246G1_scaffold_576_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

987..2651
DNA (1665bp) protein (555aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.26)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JWJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63194.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_023_246G1_scaffold_576_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2648..4225
DNA (1578bp) protein (526aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium sp. D5 RepID=F0YZL1_9CLOT
L2_023_246G1_scaffold_576_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4260..5003
DNA (744bp) protein (248aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.- 1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Clostridium sp. D5 RepID=F0YZL0_9CLOT
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EGB92865.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L2_023_246G1_scaffold_576_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5026..6213
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CBL24606.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CBL24606.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Acetyl-CoA acetyltransferase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUZ8_9FIRM
L2_023_246G1_scaffold_576_6
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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6248..7618
DNA (1371bp) protein (457aa)
Sugar transporter n=2 Tax=Anaerostipes RepID=E5VVM6_9FIRM
Sugar transporter {ECO:0000313|EMBL:CDC38255.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_023_246G1_scaffold_576_7
bacterium UASB270, Bacteria

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7728..8927
DNA (1200bp) protein (400aa)
oxidoreductase domain-containing protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625AFB
Oxidoreductase domain protein {ECO:0000313|EMBL:GAK56926.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
NADH-dependent dyhydrogenase
L2_023_246G1_scaffold_576_8
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8952..10760
DNA (1809bp) protein (603aa)
Thiamine pyrophosphate protein central region n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K9W9_BURCC
thiamine pyrophosphate protein central region
Tax=BJP_IG2157_Clostridiales_52_13
L2_023_246G1_scaffold_576_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10851..11486
DNA (636bp) protein (212aa)
Ribose 5-phosphate isomerase RpiB n=1 Tax=Ruminococcus torques L2-14 RepID=D4M307_9FIRM
Ribose 5-phosphate isomerase RpiB
Ribose 5-phosphate isomerase RpiB {ECO:0000313|EMBL:CBL25619.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_023_246G1_scaffold_576_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11488..12261
DNA (774bp) protein (258aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.125)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6Y9_9FIRM
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDC16419.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_023_246G1_scaffold_576_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12410..13780
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5UA92_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ65897.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L2_023_246G1_scaffold_576_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13932..14978
DNA (1047bp) protein (349aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CG39_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERI66306.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Transcriptional regulators
L2_023_246G1_scaffold_576_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15181..16623
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B7740C
Glycoside hydrolase family 43 {ECO:0000313|EMBL:AJG98218.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
xylA; XylA
L2_023_246G1_scaffold_576_14
Succinatimonas hippei, Succinatimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16648..17991
DNA (1344bp) protein (448aa)
Transporter, major facilitator family protein n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LLI2_9GAMM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFY06629.1}; TaxID=762983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Succinatimonas.;" source="Succinatimonas hippei YIT 12066.;"
sugar (glycoside-Pentoside-hexuronide) transporter
L2_023_246G1_scaffold_576_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18020..18943
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98516.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
putative permease
L2_023_246G1_scaffold_576_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19626..19838
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z1B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13827.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_023_246G1_scaffold_576_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20134..21243
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98260.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_023_246G1_scaffold_576_18
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(21605..22879)
DNA (1275bp) protein (425aa)
PTS system transcriptional activator n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0R0_THEOJ
PTS system transcriptional activator
PTS system transcriptional activator {ECO:0000313|EMBL:ADL07074.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
L2_023_246G1_scaffold_576_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23164..23877
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67016.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_023_246G1_scaffold_576_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24033..25103
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67014.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Hypothetical protein
L2_023_246G1_scaffold_576_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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25131..26585
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ER49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60493.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
di-/tricarboxylate transporter
L2_023_246G1_scaffold_576_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26689..28092
DNA (1404bp) protein (468aa)
MmgE/PrpD family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJ06_9FIRM
MmgE/PrpD family protein {ECO:0000313|EMBL:EEQ56581.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Immune-responsive protein 1
L2_023_246G1_scaffold_576_23
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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28129..28842
DNA (714bp) protein (238aa)
Maleate cis-trans isomerase n=2 Tax=Pyrococcus furiosus RepID=I6TXG3_9EURY
maleate cis-trans isomerase
Putative maleate cis-trans isomerase {ECO:0000313|EMBL:AAL81468.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).;"
L2_023_246G1_scaffold_576_24
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28855..29121
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FDA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12830.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
4-oxalocrotonate tautomerase
L2_023_246G1_scaffold_576_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29143..30132
DNA (990bp) protein (330aa)
Ornithine cyclodeaminase/mu-crystallin family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJ02_9FIRM
Ornithine cyclodeaminase/mu-crystallin family protein {ECO:0000313|EMBL:EEQ56577.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sbnB; 2,3-diaminopropionate biosynthesis protein SbnB
L2_023_246G1_scaffold_576_26
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30293..30664)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QWR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR07789.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
hypothetical protein
L2_023_246G1_scaffold_576_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30854..32128
DNA (1275bp) protein (425aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0Z0B0_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EGB92531.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
family 1 extracellular solute-binding protein
L2_023_246G1_scaffold_576_28
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32125..33915
DNA (1791bp) protein (597aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
histidine kinase/HAMP domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (EC:2.7.13.3)
Putative HAMP domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z0B1_9CLOT
L2_023_246G1_scaffold_576_29
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33890..35470
DNA (1581bp) protein (527aa)
Putative response regulator receiver domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z0B2_9CLOT
Putative response regulator receiver domain protein {ECO:0000313|EMBL:EGB92533.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
AraC family transcriptional regulator
L2_023_246G1_scaffold_576_30
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35575..36621
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D4Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75153.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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