ggKbase home page

L2_023_246G1_scaffold_879

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_879_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55429.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Transposase.
L2_023_246G1_scaffold_879_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128..1060)
DNA (933bp) protein (311aa)
SPFH/Band 7/PHB domain protein n=3 Tax=Clostridiales RepID=G9YRC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57091.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
stomatin family protein
L2_023_246G1_scaffold_879_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1097..1552)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CML5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20949.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_879_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1690..2814
DNA (1125bp) protein (375aa)
putative RNA methylase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57093.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_023_246G1_scaffold_879_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2830..3984
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM49714.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
S-layer y domain-containing protein
L2_023_246G1_scaffold_879_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4010..4939
DNA (930bp) protein (310aa)
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57095.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
diacylglycerol kinase
L2_023_246G1_scaffold_879_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5170..5454
DNA (285bp) protein (95aa)
10 kDa chaperonin n=3 Tax=Clostridiales RepID=G9YRD2_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_023_246G1_scaffold_879_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5957..7585
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=4 Tax=Bacteria RepID=G9YRD3_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
groEL; GroEL protein
L2_023_246G1_scaffold_879_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7780..8931
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D263_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39341.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_023_246G1_scaffold_879_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8918..9451
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=root RepID=C0D264_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54579.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_023_246G1_scaffold_879_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9690..10067
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H007_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26816.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_023_246G1_scaffold_879_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10119..10784
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FJQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00962.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L2_023_246G1_scaffold_879_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10845..11969
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38444.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_023_246G1_scaffold_879_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11985..14897
DNA (2913bp) protein (971aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A8RZW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14120.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_023_246G1_scaffold_879_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14987..15508
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03930.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_023_246G1_scaffold_879_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15519..16184
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PCQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10760.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_246G1_scaffold_879_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16325..17449
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GK46_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94940.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_023_246G1_scaffold_879_18
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17400..19364
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FBG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00969.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Type IV secretory pathway, VirD4 components
L2_023_246G1_scaffold_879_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19333..20784
DNA (1452bp) protein (484aa)
S1 RNA binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D278_9CLOT
S1 RNA binding domain protein {ECO:0000313|EMBL:EEG54561.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_023_246G1_scaffold_879_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20801..21940
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BVW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53268.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_023_246G1_scaffold_879_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21937..22728
DNA (792bp) protein (264aa)
Sortase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCR7_9FIRM
Sortase {ECO:0000313|EMBL:EHO33670.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_246G1_scaffold_879_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22794..24065
DNA (1272bp) protein (424aa)
SCP-like protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYK8_9FIRM
SCP-like protein {ECO:0000313|EMBL:EDM98507.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
S-layer domain-containing protein
L2_023_246G1_scaffold_879_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24144..29759
DNA (5616bp) protein (1872aa)
Cna protein B-type domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYK7_9FIRM
Cna protein B-type domain protein {ECO:0000313|EMBL:EDM98506.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_023_246G1_scaffold_879_24
unknown

Not on your lists

comp(29844..30254)
DNA (411bp) protein (137aa)

This feature has no annotations

L2_023_246G1_scaffold_879_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30311..30937
DNA (627bp) protein (209aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VW11_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDC04504.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
L2_023_246G1_scaffold_879_26
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31226..32074)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RW43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74638.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Domain of unknown function (DUF1814).
L2_023_246G1_scaffold_879_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32071..32667)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23636.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_246G1_scaffold_879_28
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32786..34162
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D270_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54571.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_023_246G1_scaffold_879_29
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

34810..35151
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14221.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_023_246G1_scaffold_879_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

35186..35587
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14222.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Protein of unknown function (DUF3268).
Displaying items 1-30 of 46 in total

View Taxonomy