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L2_023_246G1_scaffold_913

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_913_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(318..2192)
DNA (1875bp) protein (625aa)
PTS system, sucrose-specific IIABC component {ECO:0000313|EMBL:CDS83660.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS83660.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PTS system sucrose-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, sucrose-specific IIABC component n=7 Tax=Clostridium difficile RepID=T2W248_CLODI
L2_023_246G1_scaffold_913_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2197..3861)
DNA (1665bp) protein (555aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
oligo-1,6-glucosidase (EC:3.2.1.10)
Alpha amylase, catalytic domain protein n=7 Tax=Clostridium difficile RepID=T2W5M5_CLODI
L2_023_246G1_scaffold_913_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3875..4696)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=2 Tax=Clostridium difficile RepID=G6BR55_CLODI
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CBE02175.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_246G1_scaffold_913_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4795..5559)
DNA (765bp) protein (255aa)
Helix-turn-helix domain, rpiR family protein n=38 Tax=Clostridium difficile RepID=T2VWJ3_CLODI
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDS83654.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcriptional regulator, RpiR family
L2_023_246G1_scaffold_913_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5556..6305)
DNA (750bp) protein (250aa)
SIS domain protein n=113 Tax=Clostridium difficile RepID=G6B426_CLODI
SIS domain protein {ECO:0000313|EMBL:EHJ33558.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Transcriptional regulator, RpiR family
L2_023_246G1_scaffold_913_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6587..7639)
DNA (1053bp) protein (351aa)
ABC-2 type transporter family protein n=7 Tax=Clostridium difficile RepID=T2W3S5_CLODI
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:CDS83553.1}; ABC-2 type transporter {ECO:0000313|EMBL:CDS83651.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_246G1_scaffold_913_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7639..8379)
DNA (741bp) protein (247aa)
ABC-2 type transporter family protein n=7 Tax=Clostridium difficile RepID=T2W260_CLODI
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
integral membrane protein
L2_023_246G1_scaffold_913_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8384..9142)
DNA (759bp) protein (253aa)
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:CDS83649.1}; EC=3.6.3.28 {ECO:0000313|EMBL:CDS83649.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC transporter family protein n=6 Tax=Clostridium difficile RepID=T3I7Q7_CLODI
multidrug ABC transporter (daunorubicin resistance), ATPase
L2_023_246G1_scaffold_913_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9247..9969)
DNA (723bp) protein (241aa)
Transcriptional regulator PadR-like family protein n=7 Tax=Clostridium difficile RepID=T2W3G9_CLODI
PadR family transcriptional regulator {ECO:0000313|EMBL:CDS83648.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PadR-like family transcriptional regulator
L2_023_246G1_scaffold_913_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10070..10459)
DNA (390bp) protein (130aa)
Metallo-beta-lactamase superfamily protein n=7 Tax=Clostridium difficile RepID=T2W3P2_CLODI
Putative beta-lactamase-like hydrolase {ECO:0000313|EMBL:CDS83647.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative beta-lactamase-like hydrolase
L2_023_246G1_scaffold_913_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10456..10674)
DNA (219bp) protein (73aa)
Metallo-beta-lactamase superfamily protein n=7 Tax=Clostridium difficile RepID=T2W5G4_CLODI
Putative hydrolase {ECO:0000313|EMBL:CDS83645.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hydrolase
L2_023_246G1_scaffold_913_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10853..11491
DNA (639bp) protein (213aa)
Bacterial regulatory s, tetR family protein n=179 Tax=Clostridium difficile RepID=T3IEM5_CLODC
Transcriptional regulator, TetR family
TetR family transcriptional regulator {ECO:0000313|EMBL:CKH70329.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDS83538.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_246G1_scaffold_913_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11623..12285
DNA (663bp) protein (221aa)
Transcriptional regulatory family protein n=92 Tax=Clostridium difficile RepID=T3IG88_CLODC
Two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:CDS83643.1}; Two-component response regulator {ECO:0000313|EMBL:CDT53595.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_246G1_scaffold_913_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12285..13466
DNA (1182bp) protein (394aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
His Kinase A domain protein n=4 Tax=Clostridium difficile RepID=T3I6N3_CLODI
two-component sensor histidine kinase
L2_023_246G1_scaffold_913_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13672..16194)
DNA (2523bp) protein (841aa)
FtsX-like permease family protein n=7 Tax=Clostridium difficile RepID=T4X9F2_CLODI
ABC-type transport system, permease {ECO:0000313|EMBL:CDS83641.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC-type transport system, permease
L2_023_246G1_scaffold_913_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16191..16874)
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH70469.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH70469.1};; ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CDS83531.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDS83531.1};; Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000313|EMBL:CDS83640.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDS83640.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC transporter family protein n=158 Tax=Clostridium difficile RepID=C9XKB6_CLODC
L2_023_246G1_scaffold_913_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17218..18144)
DNA (927bp) protein (309aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Penicillin binding transpeptidase domain protein n=33 Tax=Clostridium difficile RepID=T2U5G4_CLODI
beta-lactamase
L2_023_246G1_scaffold_913_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18172..18888)
DNA (717bp) protein (239aa)
Putative membrane protein n=7 Tax=Clostridium difficile RepID=T2W5H3_CLODI
Putative membrane protein {ECO:0000313|EMBL:CDT53749.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_246G1_scaffold_913_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19220..21463
DNA (2244bp) protein (748aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CDT53759.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDT53759.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
Excinuclease ABC subunit A n=6 Tax=Clostridium difficile RepID=T3I6N0_CLODI
L2_023_246G1_scaffold_913_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21725..23839)
DNA (2115bp) protein (705aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
UvrD/REP helicase N-terminal domain protein n=31 Tax=Clostridium difficile RepID=T3IJS6_CLODC
putative helicase, UvrD family
L2_023_246G1_scaffold_913_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23923..24759)
DNA (837bp) protein (279aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=35 Tax=Clostridium difficile RepID=T3IIN2_CLODC
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CAJ67282.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_023_246G1_scaffold_913_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25354..25716)
DNA (363bp) protein (121aa)
Glyoxalase-like family protein {ECO:0000313|EMBL:EQG77983.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EQG77983.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Uncharacterized protein n=201 Tax=Clostridium difficile RepID=C9XKB0_CLODC
hypothetical protein
L2_023_246G1_scaffold_913_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25950..26414)
DNA (465bp) protein (155aa)
Uncharacterized protein n=96 Tax=Clostridium difficile RepID=C9XKA9_CLODC
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:CCL31964.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_246G1_scaffold_913_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26843..28264)
DNA (1422bp) protein (474aa)
Na+/H+ antiporter n=184 Tax=Clostridium difficile RepID=C9XKA8_CLODC
Na+/H+ antiporter
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EHJ33539.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_023_246G1_scaffold_913_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28294..29358)
DNA (1065bp) protein (355aa)
Alanine racemase domain protein {ECO:0000313|EMBL:CDS83625.1}; Ornithine racemase {ECO:0000313|EMBL:CDS83513.1}; EC=5.1.1.12 {ECO:0000313|EMBL:CDS83513.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
orr; ornithine racemase (EC:5.1.1.12)
Alanine racemase domain protein n=37 Tax=Clostridium difficile RepID=G6BR38_CLODI
L2_023_246G1_scaffold_913_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29343..30752)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T3I2P7_CLODI
Putative reactivating factor for adenosylcobalamine-dependent D-ornithine aminomutase {ECO:0000313|EMBL:CDS83511.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS83623.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative reactivating factor foradenosylcobalamine-dependent D-ornithine aminomutase
L2_023_246G1_scaffold_913_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30752..32956)
DNA (2205bp) protein (735aa)
D-ornithine aminomutase E component {ECO:0000313|EMBL:CDS83509.1}; EC=5.4.3.5 {ECO:0000313|EMBL:CDS83509.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
oraE; D-ornithine aminomutase E component (EC:5.4.3.5)
D-ornithine aminomutase E component n=7 Tax=Clostridium difficile RepID=T2W224_CLODI
L2_023_246G1_scaffold_913_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32950..33324)
DNA (375bp) protein (125aa)
oraS; D-ornithine aminomutase S component (EC:5.4.3.5)
D-ornithine aminomutase S component {ECO:0000313|EMBL:CEJ96970.1}; EC=5.4.3.5 {ECO:0000313|EMBL:CEJ96970.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
D-ornithine aminomutase S component n=140 Tax=Clostridium difficile RepID=Q188N8_CLOD6
L2_023_246G1_scaffold_913_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33402..34832)
DNA (1431bp) protein (477aa)
2-amino-4-ketopentanoate thiolase beta subunit n=41 Tax=Clostridium difficile RepID=U3WQF6_CLODI
2-amino-4-ketopentanoate thiolase beta subunit {ECO:0000313|EMBL:CCL23905.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
pyridoxal-phosphate dependent enzyme
L2_023_246G1_scaffold_913_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34825..35133)
DNA (309bp) protein (103aa)
Uncharacterized protein n=124 Tax=Clostridium difficile RepID=G6BR32_CLODI
2-amino-4-ketopentanoate thiolase alpha subunit {ECO:0000313|EMBL:CCL23904.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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