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L2_023_246G1_scaffold_948

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_246G1_scaffold_948_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..919
DNA (918bp) protein (306aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X2Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64676.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_023_246G1_scaffold_948_2
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1099..2166)
DNA (1068bp) protein (356aa)
Site-specific recombinase XerD n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LIX5_ACEWD
xerD; site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFA49864.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L2_023_246G1_scaffold_948_3
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2217..2744)
DNA (528bp) protein (176aa)
DNA-binding helix-turn-helix protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAK4_BLAHA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEX21002.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_023_246G1_scaffold_948_4
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2891..3085
DNA (195bp) protein (65aa)
Toxin-antitoxin system n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GEV3_EUBLK
toxin-antitoxin system
Toxin-antitoxin system {ECO:0000313|EMBL:ADO37783.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_023_246G1_scaffold_948_5
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3097..3360
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GEV2_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37782.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_023_246G1_scaffold_948_6
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

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3474..4475
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z5W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA34305.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
KaiC.
L2_023_246G1_scaffold_948_7
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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4752..5966
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IER6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20419.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
mob; Mob
L2_023_246G1_scaffold_948_8
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5977..6288
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9JVF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38204.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L2_023_246G1_scaffold_948_9
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6364..6948)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IR11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24261.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L2_023_246G1_scaffold_948_10
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7175..7387
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9INB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23395.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_023_246G1_scaffold_948_11
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7582..8190
DNA (609bp) protein (203aa)
TIR domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UM78_9FIRM
TIR domain protein {ECO:0000313|EMBL:ERT59999.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein
L2_023_246G1_scaffold_948_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8203..8619
DNA (417bp) protein (139aa)
Putative uncharacterized protein id=4841319 bin=GWA2_Elusi-like_A8_64_40 species=Photobacterium profundum genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
Uncharacterized protein {ECO:0000313|EMBL:ERJ97373.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_023_246G1_scaffold_948_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8632..9204
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWU7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53952.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_023_246G1_scaffold_948_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9767..10276
DNA (510bp) protein (170aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RRL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16695.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_023_246G1_scaffold_948_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10323..11330
DNA (1008bp) protein (336aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=3 Tax=Clostridium bolteae RepID=A8RRL3_9CLOT
L2_023_246G1_scaffold_948_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11440..11949)
DNA (510bp) protein (170aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Superoxide dismutase [Cu-Zn] n=7 Tax=Clostridium RepID=A8RRL1_9CLOT
hypothetical protein
L2_023_246G1_scaffold_948_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12225..13502
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZHD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16691.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_023_246G1_scaffold_948_18
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13594..14097
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=5 Tax=Clostridium RepID=N9Z617_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Transcription elongation factor
L2_023_246G1_scaffold_948_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14229..15554
DNA (1326bp) protein (442aa)
MATE efflux family protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AS31_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENZ39248.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
MATE efflux family protein
L2_023_246G1_scaffold_948_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15626..16840
DNA (1215bp) protein (405aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RRK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16688.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
DNA-binding transcriptional activator of the SARP family
L2_023_246G1_scaffold_948_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17017..18162)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RRK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16686.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
abortive infection protein
L2_023_246G1_scaffold_948_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18590..23533
DNA (4944bp) protein (1648aa)
Uncharacterized protein (Fragment) n=2 Tax=Clostridium bolteae RepID=R0BSM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47237.1}; Flags: Fragment;; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_023_246G1_scaffold_948_23
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23596..24006
DNA (411bp) protein (137aa)
Uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YA73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67122.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L2_023_246G1_scaffold_948_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24056..24853
DNA (798bp) protein (266aa)
LPXTG-domain-containing protein cell wall anchor domain (Fragment) n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZN20_9CLOT
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:ENZ41196.1}; Flags: Fragment;; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_023_246G1_scaffold_948_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25052..32938
DNA (7887bp) protein (2629aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BCH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ41992.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
LPXTG-motif cell wall anchor domain-containing protein
L2_023_246G1_scaffold_948_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33238..34398
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RRH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16669.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ankyrin repeat-containing protein
L2_023_246G1_scaffold_948_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34475..35077
DNA (603bp) protein (201aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=6 Tax=Clostridium RepID=N9Z5H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ53058.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L2_023_246G1_scaffold_948_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35452..35868
DNA (417bp) protein (139aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RRG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16664.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
MarR family transcriptional regulator
L2_023_246G1_scaffold_948_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35874..36938
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RRG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16663.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
putative secretion protein HlyD family protein
L2_023_246G1_scaffold_948_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36962..38110
DNA (1149bp) protein (383aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RRG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16662.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
Displaying items 1-30 of 38 in total

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