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L2_026_000G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_196_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..247
DNA (246bp) protein (82aa)
Sporulation transcriptional regulator SpoIIID n=2 Tax=Clostridium RepID=R6PU32_9CLOT
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDC21991.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Stage III sporulation protein D.
L2_026_000G1_scaffold_196_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

301..1725
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJ72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC21992.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_196_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1709..2374
DNA (666bp) protein (222aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium RepID=B6FR00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC21998.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative ADP-ribose pyrophosphatase
L2_026_000G1_scaffold_196_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2598..7835
DNA (5238bp) protein (1746aa)
Hyalurononglucosaminidase {ECO:0000313|EMBL:EEA81509.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EEA81509.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Hyalurononglucosaminidase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR01_9CLOT
nagH; hyaluronidase
L2_026_000G1_scaffold_196_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7936..8799
DNA (864bp) protein (288aa)
CorA-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR02_9CLOT
CorA-like protein {ECO:0000313|EMBL:EEA81510.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Mg2 transporter protein CorA family protein
L2_026_000G1_scaffold_196_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8817..9371
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PU67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22006.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Membrane-associated phospholipid phosphatase
L2_026_000G1_scaffold_196_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9352..9531
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QJB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22007.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_196_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9573..10133)
DNA (561bp) protein (187aa)
cat-1; chloramphenicol acetyltransferase (EC:2.3.1.28)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PCM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22008.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_196_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10347..15740
DNA (5394bp) protein (1798aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR06_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA81514.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterised Sugar-binding Domain.
L2_026_000G1_scaffold_196_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15788..17011)
DNA (1224bp) protein (408aa)
noxA; nitrate reductase, NADH oxidase subunit NoxA (EC:1.7.1.4)
Nitrate reductase, NADH oxidase subunit n=2 Tax=Clostridium RepID=B6FR07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22011.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_196_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17008..17460)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QJB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22012.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
anaerobic dimethylsulfoxide reductase subunit B
L2_026_000G1_scaffold_196_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17472..19355)
DNA (1884bp) protein (628aa)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:EEA81517.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EEA81517.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cooS_2; carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR09_9CLOT
L2_026_000G1_scaffold_196_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19440..19841)
DNA (402bp) protein (134aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FR10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22015.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Rrf2 family protein
L2_026_000G1_scaffold_196_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20033..21457)
DNA (1425bp) protein (475aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEA81519.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEA81519.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phospholipase D domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR11_9CLOT
hypothetical protein
L2_026_000G1_scaffold_196_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21824..23962
DNA (2139bp) protein (713aa)
PTS system, glucose-like IIB component n=2 Tax=Clostridium RepID=B6FR12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22019.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L2_026_000G1_scaffold_196_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24071..24904
DNA (834bp) protein (278aa)
PRD domain protein n=2 Tax=Clostridium RepID=B6FR13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22021.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional antiterminator, BglG
L2_026_000G1_scaffold_196_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24931..25605
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FR14_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA81522.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA-binding response regulator
L2_026_000G1_scaffold_196_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25602..26966
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Heavy metal sensor kinase n=2 Tax=Clostridium RepID=B6FR15_9CLOT
Sensor protein basS/pmrB
L2_026_000G1_scaffold_196_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27077..27658
DNA (582bp) protein (194aa)
Peptidase propeptide and YPEB domain protein n=2 Tax=Clostridium RepID=B6FR16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22027.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_196_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27749..28144
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22028.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_196_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28149..28919
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22030.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
manganese transport regulator MntR
L2_026_000G1_scaffold_196_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29142..30791
DNA (1650bp) protein (550aa)
Iron transport-associated domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR19_9CLOT
Iron transport-associated domain protein {ECO:0000313|EMBL:EEA81527.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
beta-N-acetylglucosaminidase
L2_026_000G1_scaffold_196_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30793..31512
DNA (720bp) protein (240aa)
Iron transport-associated domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FR20_9CLOT
Iron transport-associated domain protein {ECO:0000313|EMBL:EEA81528.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000G1_scaffold_196_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31516..32406
DNA (891bp) protein (297aa)
Heme ABC transporter, heme-binding protein isdE n=2 Tax=Clostridium RepID=B6FR21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22035.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
heme ABC transporter, heme-binding protein isdE
L2_026_000G1_scaffold_196_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32403..33389
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22037.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type Fe3+-siderophore transport system, permease component
L2_026_000G1_scaffold_196_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33386..34168
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FR23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22038.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_196_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34234..34980
DNA (747bp) protein (249aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=2 Tax=Clostridium RepID=B6FR24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22039.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_196_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35444..38941
DNA (3498bp) protein (1166aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PU98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22041.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_196_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38944..41607
DNA (2664bp) protein (888aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22042.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_196_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41591..42433
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FR27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22043.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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