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L2_026_000G1_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_259_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..662)
DNA (660bp) protein (220aa)
Site-specific recombinase XerD n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LM01_9FIRM
Site-specific recombinase XerD
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI97531.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_026_000G1_scaffold_259_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(698..868)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34125.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_026_000G1_scaffold_259_3
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(962..1171)
DNA (210bp) protein (70aa)
Uncharacterized protein n=6 Tax=root RepID=B5CKP0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI97529.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_026_000G1_scaffold_259_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1263..1631)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DM60_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI97528.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_026_000G1_scaffold_259_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1644..1883)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B5CKR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY34128.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_026_000G1_scaffold_259_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2077..3957)
DNA (1881bp) protein (627aa)
KaiC n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVH8_9FIRM
KaiC.
KaiC {ECO:0000313|EMBL:CBL24786.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_026_000G1_scaffold_259_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3989..5632)
DNA (1644bp) protein (548aa)
MobA/MobL family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ERS8_9FIRM
MobA/MobL family protein {ECO:0000313|EMBL:ERI97522.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
MobA/MobL family.
L2_026_000G1_scaffold_259_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5632..5997)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EWR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97521.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_026_000G1_scaffold_259_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6240..6467)
DNA (228bp) protein (76aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LM11_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL20872.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_026_000G1_scaffold_259_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6497..6907)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridiales RepID=D4LM12_9FIRM
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_026_000G1_scaffold_259_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7595..7876)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DM51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97518.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_026_000G1_scaffold_259_12
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7909..8049)
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ERS4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL20875.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_026_000G1_scaffold_259_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8248..8631)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EWQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97516.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_026_000G1_scaffold_259_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8923..11736)
DNA (2814bp) protein (938aa)
N-6 DNA Methylase n=2 Tax=Clostridiales RepID=D4LM15_9FIRM
N-6 DNA Methylase.
Uncharacterized protein {ECO:0000313|EMBL:ERI97515.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_026_000G1_scaffold_259_15
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11992..12600)
DNA (609bp) protein (203aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Clostridiales RepID=D4LM16_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL20877.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_026_000G1_scaffold_259_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12710..13009)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DM46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97513.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L2_026_000G1_scaffold_259_17
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13055..13438)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LM19_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL20880.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_026_000G1_scaffold_259_18
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13452..13679)
DNA (228bp) protein (76aa)
Excisionase from transposon Tn916 n=2 Tax=Clostridiales RepID=D4LM20_9FIRM
Excisionase from transposon Tn916.
Excisionase from transposon Tn916 {ECO:0000313|EMBL:CBL20881.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_026_000G1_scaffold_259_19
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13669..13938)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DL29_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL20882.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_026_000G1_scaffold_259_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14184..16112)
DNA (1929bp) protein (643aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJS6_9CLOT
L2_026_000G1_scaffold_259_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16131..16613)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=3 Tax=Clostridium RepID=R6PZ78_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcription elongation factor GreA
L2_026_000G1_scaffold_259_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16841..17530)
DNA (690bp) protein (230aa)
Radical SAM domain protein n=2 Tax=Clostridium RepID=R6QPC9_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CDC23802.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
radical SAM superfamily protein
L2_026_000G1_scaffold_259_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17517..18092)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23803.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_259_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18106..19083)
DNA (978bp) protein (326aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKA5_9CLOT
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EEA83568.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
iunH; inosine-uridine preferring nucleoside hydrolase
L2_026_000G1_scaffold_259_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19292..19960)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PJT1_9CLOT
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:EEA83567.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
proton-coupled thiamine transporter YuaJ
L2_026_000G1_scaffold_259_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20227..24495)
DNA (4269bp) protein (1423aa)
BNR/Asp-box repeat protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKA3_9CLOT
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EEA83566.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative sialidase (neuraminidase)
L2_026_000G1_scaffold_259_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24694..25668)
DNA (975bp) protein (325aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
tRNA-dihydrouridine synthase n=2 Tax=Clostridium RepID=B6FKA2_9CLOT
tRNA-U20-dihydrouridine synthase
L2_026_000G1_scaffold_259_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25670..26443)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=2 Tax=Clostridium RepID=B6FKA1_9CLOT
L2_026_000G1_scaffold_259_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26443..26772)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FKA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83563.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_259_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26782..27762)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=2 Tax=Clostridium RepID=B6FK99_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Displaying items 1-30 of 58 in total

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