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L2_026_000G1_scaffold_337

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_337_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(232..1107)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22359.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_337_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1123..2400)
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EEA81775.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EEA81775.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Clostridium RepID=B6FQE7_9CLOT
L2_026_000G1_scaffold_337_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2420..2956)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22357.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_337_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2980..3882)
DNA (903bp) protein (301aa)
ParB-like protein n=2 Tax=Clostridium RepID=B6FQE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22356.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ParB-like partition proteins
L2_026_000G1_scaffold_337_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3882..4649)
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Clostridium RepID=B6FQF0_9CLOT
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEA81778.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPases involved in chromosome partitioning
L2_026_000G1_scaffold_337_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4865..5821
DNA (957bp) protein (319aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22354.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
alpha/beta fold family hydrolase
L2_026_000G1_scaffold_337_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5869..6582)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Clostridium RepID=B6FQF2_9CLOT
L2_026_000G1_scaffold_337_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6589..8535)
DNA (1947bp) protein (649aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Clostridium RepID=B6FQF3_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glucose-inhibited division protein A
L2_026_000G1_scaffold_337_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8501..9874)
DNA (1374bp) protein (458aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQF4_9CLOT
tRNA modification GTPase trmE
L2_026_000G1_scaffold_337_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9941..10750)
DNA (810bp) protein (270aa)
R3H domain protein n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FVU0_9CLOT
R3H domain protein {ECO:0000313|EMBL:EEA79851.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted RNA-binding protein
L2_026_000G1_scaffold_337_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10805..12049)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22349.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L2_026_000G1_scaffold_337_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12074..12286)
DNA (213bp) protein (71aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridium RepID=B6FQF7_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
conserved hypothetical protein TIGR00278
L2_026_000G1_scaffold_337_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12290..12640)
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Ribonuclease P protein component n=2 Tax=Clostridium RepID=B6FQF8_9CLOT
ribonuclease P
L2_026_000G1_scaffold_337_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12690..12824)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=5 Tax=Firmicutes RepID=B5CNF8_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
LSU ribosomal protein L34P
L2_026_000G1_scaffold_337_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13221..14606
DNA (1386bp) protein (462aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Clostridium RepID=B6FQG1_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
chromosomal replication initiator protein DnaA
L2_026_000G1_scaffold_337_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14878..15987
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQG2_9CLOT
L2_026_000G1_scaffold_337_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15991..16200
DNA (210bp) protein (70aa)
S4 domain protein n=2 Tax=Clostridium RepID=B6FQG3_9CLOT
S4 domain protein {ECO:0000313|EMBL:EEA81703.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_337_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16223..17320
DNA (1098bp) protein (366aa)
DNA replication and repair protein RecF n=2 Tax=Clostridium RepID=B6FQG4_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
recF protein
L2_026_000G1_scaffold_337_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17331..19247
DNA (1917bp) protein (639aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Clostridium RepID=B6FQG5_9CLOT
L2_026_000G1_scaffold_337_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19265..21709
DNA (2445bp) protein (815aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQG6_9CLOT
L2_026_000G1_scaffold_337_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21754..22206
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQG7_9CLOT
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:CDC22338.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Cu/Zn superoxide dismutase
L2_026_000G1_scaffold_337_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22267..22707)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81708.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
redox-active protein
L2_026_000G1_scaffold_337_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22997..24178
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81709.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative ABC transporter substrate-binding protein
L2_026_000G1_scaffold_337_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24260..25801
DNA (1542bp) protein (514aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridium RepID=R6PFG2_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC22335.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative ABC transporter ATP-binding protein
L2_026_000G1_scaffold_337_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25794..26933
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FQH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22334.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative ABC transporter permease protein
L2_026_000G1_scaffold_337_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26933..27874
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FQH3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA81713.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative ABC transporter permease protein
L2_026_000G1_scaffold_337_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27916..28701
DNA (786bp) protein (262aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
uridine phosphorylase (EC:2.4.2.3)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QK46_9CLOT
L2_026_000G1_scaffold_337_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28711..29376
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=2 Tax=Clostridium RepID=B6FQH5_9CLOT
L2_026_000G1_scaffold_337_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29396..29815
DNA (420bp) protein (140aa)
cytidine deaminase (EC:3.5.4.5)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PFF8_9CLOT
Putative cytidine deaminase {ECO:0000313|EMBL:EEA81716.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000G1_scaffold_337_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29827..30804
DNA (978bp) protein (326aa)
adenosine deaminase (EC:3.5.4.4)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PN99_9CLOT
Putative adenosine deaminase {ECO:0000313|EMBL:EEA81717.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Displaying items 1-30 of 49 in total

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