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L2_026_000G1_scaffold_342

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_342_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..442
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZ84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23806.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_342_2
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(506..1987)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IRX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24659.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ISEnfa2 (IS1182 family) transposase
L2_026_000G1_scaffold_342_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2172..3527)
DNA (1356bp) protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MSK9_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_026_000G1_scaffold_342_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(3520..4221)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43931.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
two component transcriptional regulator, winged helix family
L2_026_000G1_scaffold_342_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4360..5316
DNA (957bp) protein (319aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS04876.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS04876.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridiales RepID=B0NKH2_CLOSV
Glycosyltransferases involved in cell wall biogenesis
L2_026_000G1_scaffold_342_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5297..7879
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22532.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_342_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8249..9472
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Clostridium RepID=B6FLV6_9CLOT
L2_026_000G1_scaffold_342_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9535..10041
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FLV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82984.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_342_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10313..11596
DNA (1284bp) protein (428aa)
Galactose/glucose-binding lipoprotein n=2 Tax=Clostridium RepID=B6FLV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22529.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
galactose/glucose-binding lipoprotein
L2_026_000G1_scaffold_342_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11713..13221
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FLV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22528.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_342_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13240..14895
DNA (1656bp) protein (552aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW0_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEA82987.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_026_000G1_scaffold_342_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15019..16632
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PVN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22526.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
two component transcriptional regulator, AraC family
L2_026_000G1_scaffold_342_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16622..18484
DNA (1863bp) protein (621aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG61_9CLOT
L2_026_000G1_scaffold_342_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18474..19439
DNA (966bp) protein (322aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=2 Tax=Clostridium RepID=B6FLW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22524.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_342_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19457..20473
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82955.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_026_000G1_scaffold_342_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20499..21017
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22522.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_342_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21107..22414)
DNA (1308bp) protein (436aa)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW7_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82957.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosidases
L2_026_000G1_scaffold_342_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22638..22766
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75631.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_026_000G1_scaffold_342_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22793..23098
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82958.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000G1_scaffold_342_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23091..23765
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82959.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000G1_scaffold_342_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23796..25793
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82959.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000G1_scaffold_342_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25855..26571
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82960.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_342_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26561..26827
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82961.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Coenzyme PQQ synthesis protein D (PqqD)
L2_026_000G1_scaffold_342_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26843..27301
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82962.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_342_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27454..27882
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=2 Tax=Clostridium RepID=B6FLX3_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
LSU ribosomal protein L13P
L2_026_000G1_scaffold_342_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27909..28301
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=2 Tax=Clostridium RepID=B6FLX4_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
30S ribosomal protein S9
L2_026_000G1_scaffold_342_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29050..29898
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55341.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATPases involved in chromosome partitioning
L2_026_000G1_scaffold_342_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29852..30823
DNA (972bp) protein (324aa)
ParB-like partition protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55340.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ParB-like partition proteins
L2_026_000G1_scaffold_342_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31106..35335
DNA (4230bp) protein (1410aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34089.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Cna protein B-type domain.
L2_026_000G1_scaffold_342_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35372..35461
DNA (90bp) protein (30aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34088.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying items 1-30 of 43 in total

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