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L2_026_000G1_scaffold_424

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_424_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1..204
DNA (204bp) protein (68aa)
Arginine repressor n=38 Tax=Lactobacillus casei group RepID=C5F3V0_LACPA
Arginine pathway regulatory protein ArgR, repressor of arg regulon
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
L2_026_000G1_scaffold_424_2
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

209..1909
DNA (1701bp) protein (567aa)
DNA repair protein RecN n=38 Tax=Lactobacillus casei group RepID=K0N5J9_LACCA
recN; DNA repair protein recN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_026_000G1_scaffold_424_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2080..2217)
DNA (138bp) protein (46aa)
Uncharacterized protein n=19 Tax=Lactobacillus casei group RepID=K0N5U1_LACCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC48515.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L2_026_000G1_scaffold_424_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2214..2516)
DNA (303bp) protein (101aa)
Uncharacterized protein n=7 Tax=Lactobacillus casei group RepID=F2M6D8_LACCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPC54442.1}; TaxID=1256200 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp7.;"
L2_026_000G1_scaffold_424_5
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2625..3038
DNA (414bp) protein (138aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=5 Tax=Lactobacillus casei group RepID=B3WEX5_LACCB
Esterase of the alpha-beta hydrolase superfamily protein
Esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:CCK22760.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L2_026_000G1_scaffold_424_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3049..3312
DNA (264bp) protein (88aa)
Alpha-beta hydrolase family esterase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp14 RepID=S2QFC2_LACPA
patatin
Uncharacterized protein {ECO:0000313|EMBL:BAN71850.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_026_000G1_scaffold_424_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3379..4005
DNA (627bp) protein (209aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Guanylate kinase n=52 Tax=Lactobacillus casei group RepID=K0N5J6_LACCA
Guanylate kinase
L2_026_000G1_scaffold_424_8
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4072..4320
DNA (249bp) protein (83aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
DNA-directed RNA polymerase subunit omega n=53 Tax=Lactobacillus casei group RepID=RPOZ_LACC3
DNA-directed RNA polymerase subunit K/omega
L2_026_000G1_scaffold_424_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4467..5666
DNA (1200bp) protein (400aa)
Phosphopantothenoylcysteinesynthetase/ decarboxyla se (EC 6.3.2.5) n=10 Tax=Lactobacillus casei group RepID=B3WEX1_LACCB
Pantothenate metabolism flavoprotein Dfp
DNA/pantothenate metabolism flavoprotein {ECO:0000313|EMBL:ERN50114.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_026_000G1_scaffold_424_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5710..8088
DNA (2379bp) protein (793aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Primosomal replication protein N (Factor Y) n=8 Tax=Lactobacillus casei group RepID=B3WEX0_LACCB
priA; DNA replication factor Y
L2_026_000G1_scaffold_424_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8156..9112
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
Methionyl-tRNA formyltransferase n=19 Tax=Lactobacillus casei group RepID=FMT_LACCB
Methionyl-tRNA formyltransferase
L2_026_000G1_scaffold_424_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9099..10439
DNA (1341bp) protein (447aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
RNA methyltransferase n=4 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6C085_LACPA
16S rRNA methyltransferase
L2_026_000G1_scaffold_424_13
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10449..11192
DNA (744bp) protein (248aa)
Serine/threonine specific protein phosphatase (Putative) n=7 Tax=Lactobacillus casei group RepID=B3WEW7_LACCB
pp2C; Protein serine/threonine phosphatase
Uncharacterized protein {ECO:0000313|EMBL:CCK22750.1}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
L2_026_000G1_scaffold_424_14
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11189..13189
DNA (2001bp) protein (667aa)
Serine/threonine-protein kinase PrkC {ECO:0000313|EMBL:CCK22749.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CCK22749.1};; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
Serine/threonine protein kinase (Putative) n=4 Tax=Lactobacillus casei RepID=B3WEW6_LACCB
Serine/threonine protein kinase
L2_026_000G1_scaffold_424_15
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13186..14091
DNA (906bp) protein (302aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
Putative ribosome biogenesis GTPase RsgA n=20 Tax=Lactobacillus casei group RepID=B3WEW5_LACCB
Ribosome small subunit-stimulated GTPase EngC
L2_026_000G1_scaffold_424_16
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14164..14814
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
Ribulose-phosphate 3-epimerase n=45 Tax=Lactobacillus casei group RepID=K0N5T1_LACCA
Ribulose-phosphate 3-epimerase
L2_026_000G1_scaffold_424_17
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14811..15479
DNA (669bp) protein (223aa)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCK22746.1}; EC=2.7.6.2 {ECO:0000313|EMBL:CCK22746.1};; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
Thiamin pyrophosphokinase n=9 Tax=Lactobacillus casei group RepID=B3WEW3_LACCB
thiamine diphosphokinase
L2_026_000G1_scaffold_424_18
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(15922..16107)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=56 Tax=Lactobacillus casei group RepID=RL28_LACC3
LSU ribosomal protein L28p
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_026_000G1_scaffold_424_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16611..16973
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei ATCC 25302 RepID=C2FF50_LACPA
hypothetical protein
General stress protein, Gls24 family {ECO:0000313|EMBL:EPC15626.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L2_026_000G1_scaffold_424_20
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17033..18709
DNA (1677bp) protein (559aa)
Dihydroxyacetone kinase related enzyme n=16 Tax=Lactobacillus casei group RepID=B3WEW0_LACCB
Dak phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EPC56165.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp123.;"
L2_026_000G1_scaffold_424_21
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18742..20898
DNA (2157bp) protein (719aa)
ATP-dependent DNA helicase recG n=17 Tax=Lactobacillus casei group RepID=K0N5S7_LACCA
DNA helicase RecG {ECO:0000313|EMBL:BAN71834.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
DNA helicase RecG
L2_026_000G1_scaffold_424_22
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20920..21945
DNA (1026bp) protein (342aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
Phosphate acyltransferase n=15 Tax=Lactobacillus casei group RepID=PLSX_LACC3
plsX; fatty acid/phospholipid synthesis protein PlsX
L2_026_000G1_scaffold_424_23
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21999..22241
DNA (243bp) protein (81aa)
Acyl carrier protein n=54 Tax=Lactobacillus casei group RepID=K0N988_LACCA
Acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_026_000G1_scaffold_424_24
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22691..23713
DNA (1023bp) protein (341aa)
Oligopeptide ABC transporter ATP-binding protein n=44 Tax=Lactobacillus casei group RepID=B3WEV6_LACCB
appD; ABC transporter ATP-binding protein
Oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:EPC37315.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L2_026_000G1_scaffold_424_25
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23717..24670
DNA (954bp) protein (318aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI67715.1}; EC=3.6.3.24 {ECO:0000313|EMBL:EEI67715.1};; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
Oligopeptide transport ATP-binding protein OppF n=18 Tax=Lactobacillus casei group RepID=K0N5I3_LACCA
ABC transporter ATP-binding protein
L2_026_000G1_scaffold_424_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24670..25632
DNA (963bp) protein (321aa)
ABC-type dipeptide/oligopeptide/nickel transport system n=54 Tax=Lactobacillus RepID=C5F3S5_LACPA
oligopeptide transport system permease OppB
Oligopeptide transport system permease protein oppB {ECO:0000313|EMBL:EPC85501.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_026_000G1_scaffold_424_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25649..26557
DNA (909bp) protein (303aa)
Oligopeptide transport system permease protein oppC n=17 Tax=Lactobacillus casei group RepID=K0MW34_LACCA
Oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:EEI67717.1}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
L2_026_000G1_scaffold_424_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26751..28544
DNA (1794bp) protein (598aa)
Oligopeptide ABC trasporter substrate binding protein n=13 Tax=Lactobacillus casei group RepID=B3WEV1_LACCB
Oligopeptide ABC transporter substrate-binding protein
Oligopeptide-binding protein oppA {ECO:0000313|EMBL:EPC55384.1}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
L2_026_000G1_scaffold_424_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28761..29456
DNA (696bp) protein (232aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1215914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei W56.;"
Ribonuclease 3 n=5 Tax=Lactobacillus casei group RepID=K0NB31_LACCA
ribonuclease III
L2_026_000G1_scaffold_424_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29474..33028
DNA (3555bp) protein (1185aa)
Chromosome partition protein Smc n=18 Tax=Lactobacillus casei group RepID=K0N5H9_LACCA
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=525337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei ATCC 25302.;"
chromosome segregation protein SMC
Displaying items 1-30 of 44 in total

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