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L2_026_000G1_scaffold_446

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_446_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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193..2391
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67583.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L2_026_000G1_scaffold_446_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2531..3379
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5UFI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67582.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bglG2; cryptic beta-glucoside bgl operon antiterminator
L2_026_000G1_scaffold_446_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3476..4117
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U8W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49347.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_000G1_scaffold_446_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4207..4470)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=3 Tax=Clostridiales RepID=F7JUL9_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SSU ribosomal protein S20P
L2_026_000G1_scaffold_446_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4660..5637
DNA (978bp) protein (326aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=4 Tax=Clostridiales RepID=A7B897_RUMGN
L2_026_000G1_scaffold_446_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5647..6876
DNA (1230bp) protein (410aa)
Stage II sporulation protein P n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B898_RUMGN
Stage II sporulation protein P {ECO:0000313|EMBL:EDN75831.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Stage II sporulation protein P (SpoIIP).
L2_026_000G1_scaffold_446_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6974..8896
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=4 Tax=Clostridiales RepID=A7B899_RUMGN
DNA gyrase, B subunit {ECO:0000313|EMBL:ETD16715.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_000G1_scaffold_446_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8926..11169
DNA (2244bp) protein (748aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
DNA gyrase/topoisomerase IV, A subunit n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8A0_RUMGN
L2_026_000G1_scaffold_446_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11575..12042
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=4 Tax=Clostridiales RepID=A7B8A1_RUMGN
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_026_000G1_scaffold_446_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12062..13255
DNA (1194bp) protein (398aa)
Transcription termination factor NusA n=4 Tax=Clostridiales RepID=A7B8A2_RUMGN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcription termination factor NusA
L2_026_000G1_scaffold_446_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13278..13556
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67573.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_026_000G1_scaffold_446_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13543..13866
DNA (324bp) protein (108aa)
Ribosomal protein L7Ae n=2 Tax=Clostridiales RepID=A7B8A4_RUMGN
Ribosomal protein L7Ae {ECO:0000313|EMBL:CCZ67572.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_026_000G1_scaffold_446_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13883..16450
DNA (2568bp) protein (856aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8V8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bacterial translation initiation factor 2 (bIF-2)
L2_026_000G1_scaffold_446_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16460..16831
DNA (372bp) protein (124aa)
Ribosome-binding factor A n=2 Tax=Clostridiales RepID=A7B8A6_RUMGN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ribosome-binding factor A
L2_026_000G1_scaffold_446_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16838..17797
DNA (960bp) protein (320aa)
DHHA1 domain protein n=4 Tax=Clostridiales RepID=A7B8A7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67569.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Exopolyphosphatase-related proteins
L2_026_000G1_scaffold_446_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17819..18739
DNA (921bp) protein (307aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=4 Tax=Clostridiales RepID=A7B8A8_RUMGN
L2_026_000G1_scaffold_446_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18742..19641
DNA (900bp) protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=4 Tax=Clostridiales RepID=A7B8A9_RUMGN
L2_026_000G1_scaffold_446_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19650..21401
DNA (1752bp) protein (584aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Clostridiales RepID=A7B8B0_RUMGN
helicase Ski2
L2_026_000G1_scaffold_446_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21389..22459
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49330.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
chemotaxis protein CheY
L2_026_000G1_scaffold_446_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22456..23712
DNA (1257bp) protein (419aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49329.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
extracellular solute-binding protein
L2_026_000G1_scaffold_446_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23938..25263
DNA (1326bp) protein (442aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49328.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter binding protein
L2_026_000G1_scaffold_446_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25352..26272
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPE9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49327.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative ABC-type sugar transport system, permease component
L2_026_000G1_scaffold_446_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26272..27135
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=4 Tax=Clostridiales RepID=A7B8B5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49326.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sugar ABC transporter permease
L2_026_000G1_scaffold_446_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27151..28410
DNA (1260bp) protein (420aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Clostridiales RepID=A7B8B6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49325.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
oxidoreductase
L2_026_000G1_scaffold_446_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28413..29720
DNA (1308bp) protein (436aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TW81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49324.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative glycosyl hydrolase
L2_026_000G1_scaffold_446_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29847..30113
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=4 Tax=Clostridiales RepID=A7B8B8_RUMGN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
SSU ribosomal protein S15P
L2_026_000G1_scaffold_446_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30333..32423
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=4 Tax=Clostridiales RepID=A7B8B9_RUMGN
L2_026_000G1_scaffold_446_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33521..34231
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNI6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49320.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PAP2 superfamily.
L2_026_000G1_scaffold_446_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34221..35282
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49319.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_026_000G1_scaffold_446_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35279..35947
DNA (669bp) protein (223aa)
Phosphatidylserine synthase (EC:2.7.8.8)
CDP-alcohol phosphatidyltransferase n=4 Tax=Clostridiales RepID=A7B8I7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49318.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Displaying items 1-30 of 35 in total

View Taxonomy