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L2_026_000G1_scaffold_547

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_547_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(73..726)
DNA (654bp) protein (218aa)
TraG protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZES7_EUBR3
TraG protein
TraG protein {ECO:0000313|EMBL:ACR74593.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000G1_scaffold_547_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(723..1193)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4ML51_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34484.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_026_000G1_scaffold_547_3

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comp(1285..2334)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD113 RepID=T4YNC5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EKC68319.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000G1_scaffold_547_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2349..3062)
DNA (714bp) protein (238aa)
Antirestriction protein (ArdA) n=7 Tax=root RepID=D4ML53_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74596.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000G1_scaffold_547_5
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3067..4152)
DNA (1086bp) protein (362aa)
C-5 cytosine-specific DNA methylase n=4 Tax=root RepID=A7VCW0_9CLOT
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:EDO58707.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
DNA-cytosine methyltransferase
L2_026_000G1_scaffold_547_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4139..4495)
DNA (357bp) protein (119aa)
Uncharacterized protein n=6 Tax=root RepID=A7VCW1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO58709.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L2_026_000G1_scaffold_547_7
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4805..6178)
DNA (1374bp) protein (458aa)
ParB/RepB/Spo0J family partition domain protein n=1 Tax=Clostridium difficile CD113 RepID=T4YLD8_CLODI
ParB-like protein {ECO:0000313|EMBL:EDO58710.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ParB-like partition protein
L2_026_000G1_scaffold_547_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6230..7027)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FP42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82228.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
conserved hypothetical protein (putative transposase or invertase)
L2_026_000G1_scaffold_547_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7192..7779
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22919.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted transcriptional regulators
L2_026_000G1_scaffold_547_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7891..12366)
DNA (4476bp) protein (1492aa)
1,2-A-L-fucosidase (EC:3.2.1.51)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22920.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_547_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12609..17258)
DNA (4650bp) protein (1550aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FP45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82231.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
alpha-L-fucosidase
L2_026_000G1_scaffold_547_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17453..23767)
DNA (6315bp) protein (2105aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QLS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22922.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_547_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23800..24051)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FP47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82233.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000G1_scaffold_547_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24003..25343)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82234.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
replicative DNA helicase
L2_026_000G1_scaffold_547_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25354..25800)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQ57_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LSU ribosomal protein L9P
L2_026_000G1_scaffold_547_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25803..27851)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FP50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82236.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L2_026_000G1_scaffold_547_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27975..33758)
DNA (5784bp) protein (1928aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 PF18_9CLOT">RepID=R6PF18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22928.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
endo-alpha-N-acetylgalactosaminidase
L2_026_000G1_scaffold_547_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(34020..34397)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Clostridium RepID=B6FP53_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
LSU ribosomal protein L12P
L2_026_000G1_scaffold_547_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(34484..35017)
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FP54_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_547_20
unknown

Not on your lists

comp(35260..35349)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 20 items

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