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L2_026_000G1_scaffold_597

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_597_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..353
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81329.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Putative phage replication protein RstA
L2_026_000G1_scaffold_597_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

665..1807
DNA (1143bp) protein (381aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRP3_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEA81330.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Site-specific recombinase XerD
L2_026_000G1_scaffold_597_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1896..2576
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=2 Tax=Clostridium RepID=B6FRP4_9CLOT
L2_026_000G1_scaffold_597_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2591..2743
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22189.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_597_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2761..3237
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridium PF42_9CLOT">RepID=R6PF42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22190.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Glycopeptide antibiotics resistance protein
L2_026_000G1_scaffold_597_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3212..3571
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22191.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_597_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3572..5638
DNA (2067bp) protein (689aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81335.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Leucyl aminopeptidase (aminopeptidase T)
L2_026_000G1_scaffold_597_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5794..6306
DNA (513bp) protein (171aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Clostridium RepID=B6FRP9_9CLOT
L2_026_000G1_scaffold_597_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6329..7354
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PMW8_9CLOT
PurM; phosphoribosylaminoimidazole synthetase
L2_026_000G1_scaffold_597_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7348..7980
DNA (633bp) protein (211aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=2 Tax=Clostridium RepID=B6FRQ1_9CLOT
L2_026_000G1_scaffold_597_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7990..9261
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=2 Tax=Clostridium RepID=B6FRQ2_9CLOT
L2_026_000G1_scaffold_597_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9413..9781
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=B6FRQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22197.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GntR family transcriptional regulator
L2_026_000G1_scaffold_597_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9799..12243
DNA (2445bp) protein (815aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRQ4_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEA81341.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPases with chaperone activity, ATP-binding subunit
L2_026_000G1_scaffold_597_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12309..12722
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81342.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000G1_scaffold_597_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12801..14156
DNA (1356bp) protein (452aa)
DNA repair protein radA n=2 Tax=Clostridium RepID=B6FRQ6_9CLOT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA repair protein RadA
L2_026_000G1_scaffold_597_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14216..15088)
DNA (873bp) protein (291aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEA81344.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEA81344.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=2 Tax=Clostridium RepID=B6FRQ7_9CLOT
L2_026_000G1_scaffold_597_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15100..15768)
DNA (669bp) protein (223aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EEA81345.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEA81345.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=2 Tax=Clostridium RepID=B6FRQ8_9CLOT
L2_026_000G1_scaffold_597_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15965..17503
DNA (1539bp) protein (513aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22203.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_597_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17518..18207
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22204.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_597_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18260..19450)
DNA (1191bp) protein (397aa)
Hydrogenase maturation GTPase HydF n=2 Tax=Clostridium RepID=B6FRR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22205.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
small GTP-binding protein
L2_026_000G1_scaffold_597_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19461..20882)
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=2 Tax=Clostridium RepID=B6FRR2_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEA81349.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
iron-only hydrogenase maturation protein HydG
L2_026_000G1_scaffold_597_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20995..22032)
DNA (1038bp) protein (346aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=2 Tax=Clostridium RepID=B6FRR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22207.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_597_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22057..22308)
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PD25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22208.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_026_000G1_scaffold_597_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22597..23295
DNA (699bp) protein (233aa)
nrdG; ribonucleoside-triphosphate reductase-like protein (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=2 Tax=Clostridium RepID=B6FRR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22209.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_026_000G1_scaffold_597_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23415..25781
DNA (2367bp) protein (789aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EEA81353.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EEA81353.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridium RepID=B6FRR6_9CLOT
L2_026_000G1_scaffold_597_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25800..26594
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRR7_9CLOT
L2_026_000G1_scaffold_597_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26644..27249)
DNA (606bp) protein (202aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium RepID=B6FRR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22212.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Transcriptional regulator
L2_026_000G1_scaffold_597_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27367..29331)
DNA (1965bp) protein (655aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Threonine--tRNA ligase n=2 Tax=Clostridium RepID=B6FRR9_9CLOT
threonyl-tRNA synthetase
L2_026_000G1_scaffold_597_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29823..31976
DNA (2154bp) protein (718aa)
Tex-like protein N-terminal domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRS0_9CLOT
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EEA81357.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Transcriptional accessory protein
L2_026_000G1_scaffold_597_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31979..32692
DNA (714bp) protein (238aa)
SIS domain protein n=2 Tax=Clostridium RepID=B6FRS1_9CLOT
SIS domain protein {ECO:0000313|EMBL:EEA81358.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
SIS domain protein
Displaying 30 items

View Taxonomy