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L2_026_000G1_scaffold_618

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_618_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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108..1193
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=3 Tax=Lachnospiraceae RepID=A7AZ74_RUMGN
L2_026_000G1_scaffold_618_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1234..2907
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Clostridiales RepID=A7AZ73_RUMGN
L2_026_000G1_scaffold_618_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2920..4599
DNA (1680bp) protein (560aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=4 Tax=Clostridiales RepID=A7AZ72_RUMGN
L2_026_000G1_scaffold_618_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4646..5728
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=3 Tax=Lachnospiraceae RepID=A7AZ71_RUMGN
L2_026_000G1_scaffold_618_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5730..6893
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSH4_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CCZ66214.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_026_000G1_scaffold_618_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7051..8439
DNA (1389bp) protein (463aa)
HMGL-like protein n=4 Tax=Clostridiales RepID=A7AZ69_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20514.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Isopropylmalate/homocitrate/citramalate synthases
L2_026_000G1_scaffold_618_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8462..9127
DNA (666bp) protein (222aa)
Transcriptional regulator, GntR family n=4 Tax=Clostridiales RepID=A7AZ68_RUMGN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDN79073.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, GntR family
L2_026_000G1_scaffold_618_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9141..10337
DNA (1197bp) protein (399aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=3 Tax=Clostridiales RepID=F7JSX8_9FIRM
L2_026_000G1_scaffold_618_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10539..11030
DNA (492bp) protein (164aa)
RNA polymerase sigma factor n=2 Tax=Lachnospiraceae RepID=F7JSX7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sigma-70 family RNA polymerase sigma factor
L2_026_000G1_scaffold_618_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11023..11673
DNA (651bp) protein (217aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZ65_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20510.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L2_026_000G1_scaffold_618_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11706..13631)
DNA (1926bp) protein (642aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7AZ64_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20509.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_026_000G1_scaffold_618_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13783..14427
DNA (645bp) protein (215aa)
Redox-sensing transcriptional repressor Rex n=4 Tax=Clostridiales RepID=F7JSX4_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
CoA-binding protein
L2_026_000G1_scaffold_618_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14543..16015
DNA (1473bp) protein (491aa)
YjeF domain protein n=3 Tax=Lachnospiraceae RepID=A7AZ62_RUMGN
YjeF family domain-containing protein {ECO:0000313|EMBL:ETD20507.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L2_026_000G1_scaffold_618_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16018..17166
DNA (1149bp) protein (383aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Clostridiales RepID=F7JSX3_9FIRM
L2_026_000G1_scaffold_618_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17264..17611
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
mRNA interferase n=4 Tax=Clostridiales RepID=A7AZ60_RUMGN
Growth inhibitor
L2_026_000G1_scaffold_618_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17711..18442
DNA (732bp) protein (244aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BZG7_RUMGN
Probable transcriptional regulatory protein RUMGNA_00575 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein TIGR01033
L2_026_000G1_scaffold_618_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18543..18674
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZ58_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49769.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_000G1_scaffold_618_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18810..19589
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TKH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49767.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_026_000G1_scaffold_618_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19582..20856
DNA (1275bp) protein (425aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=4 Tax=Clostridiales RepID=A7AZ54_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66199.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_026_000G1_scaffold_618_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21010..21699
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BZG2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20499.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Protease subunit of ATP-dependent Clp proteases
L2_026_000G1_scaffold_618_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21764..24328
DNA (2565bp) protein (855aa)
FtsK/SpoIIIE family protein n=3 Tax=Lachnospiraceae RepID=A7AZ51_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20498.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA translocase FtsK
L2_026_000G1_scaffold_618_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24345..26018
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=Clostridiales RepID=A7AZ50_RUMGN
L2_026_000G1_scaffold_618_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26030..26869
DNA (840bp) protein (280aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=4 Tax=Clostridiales RepID=A7AZ49_RUMGN
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_026_000G1_scaffold_618_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26881..28122
DNA (1242bp) protein (414aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TSF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66194.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Tetratricopeptide repeat.
L2_026_000G1_scaffold_618_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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28309..29490
DNA (1182bp) protein (394aa)
NADPH-dependent butanol dehydrogenase n=4 Tax=Clostridiales RepID=A7AZ47_RUMGN
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EGN49760.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Alcohol dehydrogenase, class IV
L2_026_000G1_scaffold_618_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29655..30545
DNA (891bp) protein (297aa)
Ferredoxin--NADP+ reductase, subunit alpha {ECO:0000313|EMBL:EDN79050.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EDN79050.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Ferredoxin--NADP+ reductase, subunit alpha n=4 Tax=Clostridiales RepID=A7AZ45_RUMGN
L2_026_000G1_scaffold_618_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30545..31726
DNA (1182bp) protein (394aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDN79049.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EDN79049.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Clostridiales RepID=A7AZ44_RUMGN
Displaying 27 items

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