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L2_026_000G1_scaffold_904

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000G1_scaffold_904_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5..247)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGX6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20685.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_026_000G1_scaffold_904_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

331..2559
DNA (2229bp) protein (743aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDM20684.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDM20684.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Formate C-acetyltransferase n=4 Tax=root RepID=A5ZGX5_9BACE
formate acetyltransferase
L2_026_000G1_scaffold_904_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2606..3304
DNA (699bp) protein (233aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=3 Tax=Bacteroides RepID=A5ZGX4_9BACE
L2_026_000G1_scaffold_904_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3297..3551)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZGX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75044.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
family 7 carbohydrate esterase
L2_026_000G1_scaffold_904_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3831..5093)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EMA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21339.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000G1_scaffold_904_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5096..5644)
DNA (549bp) protein (183aa)
Sigma-70 region 2 n=3 Tax=Bacteroides RepID=A5ZGX1_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EDM20680.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase sigma factor, sigma-70 family
L2_026_000G1_scaffold_904_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5821..6543
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V7T9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75047.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000G1_scaffold_904_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6655..7335)
DNA (681bp) protein (227aa)
MIP family channel protein n=3 Tax=Bacteroides RepID=A5ZGW8_9BACE
MIP family channel protein {ECO:0000313|EMBL:EDM20677.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
MIP family channel proteins
L2_026_000G1_scaffold_904_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7349..8374
DNA (1026bp) protein (342aa)
Putative membrane protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGW7_9BACE
Putative membrane protein {ECO:0000313|EMBL:EDM20676.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_026_000G1_scaffold_904_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8349..9245)
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGW6_9BACE
LysR substrate binding domain protein {ECO:0000313|EMBL:EDM20675.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Transcriptional regulator
L2_026_000G1_scaffold_904_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9382..9858
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ERB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22869.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
L2_026_000G1_scaffold_904_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10462..11574)
DNA (1113bp) protein (371aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.26)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9Q1Z0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22868.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000G1_scaffold_904_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11584..12618)
DNA (1035bp) protein (345aa)
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily (EC:4.2.1.113)
O-succinylbenzoate synthase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VC34_9BACE
O-succinylbenzoate synthase {ECO:0000313|EMBL:EIY22867.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000G1_scaffold_904_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12627..13451)
DNA (825bp) protein (275aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
1,4-Dihydroxy-2-naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=3 Tax=Bacteroides RepID=A5ZGW2_9BACE
L2_026_000G1_scaffold_904_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13455..15122)
DNA (1668bp) protein (556aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase (EC:2.2.1.9 2.5.1.64)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V8X1_9BACE
L2_026_000G1_scaffold_904_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15152..16246)
DNA (1095bp) protein (365aa)
isochorismate synthases (EC:5.4.4.2)
Isochorismate synthase n=2 Tax=Bacteroides caccae RepID=I9ERB6_9BACE
Isochorismate synthase {ECO:0000313|EMBL:EIY22864.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000G1_scaffold_904_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16267..17499)
DNA (1233bp) protein (411aa)
Cof-like hydrolase n=3 Tax=Bacteroides RepID=A5ZGV9_9BACE
Cof-like hydrolase {ECO:0000313|EMBL:EIY22863.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
uncharacterized domain 1
L2_026_000G1_scaffold_904_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17584..17946)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VC29_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22862.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000G1_scaffold_904_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18026..19804)
DNA (1779bp) protein (593aa)
Transcriptional regulator AraC family n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UH93_9BACE
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ75059.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
AraC-type DNA-binding domain-containing proteins
L2_026_000G1_scaffold_904_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20121..20276)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V8W7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22860.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000G1_scaffold_904_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20363..21280)
DNA (918bp) protein (306aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA large subunit methyltransferase F n=2 Tax=Bacteroides caccae RepID=A5ZGV5_9BACE
SAM-dependent methyltransferase
L2_026_000G1_scaffold_904_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21612..22232
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=3 Tax=Bacteroides RepID=A5ZGV4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22858.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative TetR-family transcriptional regulator
L2_026_000G1_scaffold_904_23
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22402..22623
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JGR4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01846.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L2_026_000G1_scaffold_904_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22764..23378
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R0J4Z0_9BACE
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD48142.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_026_000G1_scaffold_904_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23411..24583
DNA (1173bp) protein (391aa)
Integrase/recombinase XerD n=2 Tax=Parabacteroides RepID=N2AXL2_9PORP
Integrase/recombinase XerD {ECO:0000313|EMBL:EOS18847.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
tyrosine type site-specific recombinase
L2_026_000G1_scaffold_904_26
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24696..25322
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R8L0_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY35065.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L2_026_000G1_scaffold_904_27
unknown

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25450..25770
DNA (321bp) protein (107aa)

This feature has no annotations

L2_026_000G1_scaffold_904_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25923..26765
DNA (843bp) protein (281aa)
Putative AraC family transcriptional regulator n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WS03_BACF6
putative AraC family transcriptional regulator
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:CBW21922.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_026_000G1_scaffold_904_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26797..27699
DNA (903bp) protein (301aa)
Tetracycline resistance element mobilization regulatory protein RteC n=10 Tax=Bacteroides RepID=D7K275_9BACE
putative regulatory protein RteC homolog
Putative regulatory protein RteC homolog {ECO:0000313|EMBL:BAD48129.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_026_000G1_scaffold_904_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27735..28163
DNA (429bp) protein (143aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I8XHV6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY62696.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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