ggKbase home page

L2_026_000M1_scaffold_5110

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_5110_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)
LSU ribosomal protein L12P
L2_026_000M1_scaffold_5110_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(124..642)
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=7 Tax=Bacteroides RepID=A6KYK5_BACV8
rplJ; 50S ribosomal protein L10
Uncharacterized protein {ECO:0000313|EMBL:EIY78641.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_026_000M1_scaffold_5110_3
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(658..1356)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=7 Tax=Bacteroides RepID=RL1_BACV8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_026_000M1_scaffold_5110_4
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1372..1710)
DNA (339bp) protein (113aa)
50S ribosomal protein L11 n=13 Tax=Bacteroides RepID=RL11_BACV8
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_026_000M1_scaffold_5110_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1724..2224)
DNA (501bp) protein (167aa)
Transcription termination/antitermination protein NusG n=7 Tax=Bacteroides RepID=A6KYK8_BACV8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_026_000M1_scaffold_5110_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2238..2432)
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=5 Tax=Bacteroides RepID=C6Z0J3_9BACE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
preprotein translocase subunit SecE
L2_026_000M1_scaffold_5110_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2579..3763)
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=7 Tax=Bacteroides RepID=EFTU_BACV8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_026_000M1_scaffold_5110_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4091..4390)
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=7 Tax=Bacteroides RepID=A6KYL0_BACV8
sigma-54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:KDS27897.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_026_000M1_scaffold_5110_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4405..5286)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=6 Tax=Bacteroides RepID=A6KYL1_BACV8
tyrosine type site-specific recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_026_000M1_scaffold_5110_10
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5364..5555)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=14 Tax=Bacteroides RepID=RS21_BACV8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_026_000M1_scaffold_5110_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5724..7505
DNA (1782bp) protein (594aa)
Peptidase, M24 family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB62_BACVU
Metallopeptidase M24 family protein {ECO:0000313|EMBL:KDS27900.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
aminopeptidase
L2_026_000M1_scaffold_5110_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7515..8039
DNA (525bp) protein (175aa)
Acetyltransferase n=5 Tax=Bacteroides RepID=A6KYL4_BACV8
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EOR98619.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_026_000M1_scaffold_5110_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8085..8576
DNA (492bp) protein (164aa)
Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Bacteroides vulgatus RepID=R9H4C1_BACVU
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KDS54227.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_026_000M1_scaffold_5110_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8690..8980
DNA (291bp) protein (97aa)
Acetyltransferase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P660_9BACE
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CDF19758.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying 14 items

View Taxonomy