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L2_026_000M1_scaffold_2128

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_2128_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

204..416
DNA (213bp) protein (71aa)
Uncharacterized protein n=27 Tax=Bacteria RepID=H8LCF0_ENTFU
Uncharacterized protein {ECO:0000313|EMBL:KJF38462.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

413..712
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A6NXW5_9FIRM
Thiamine transporter {ECO:0000313|EMBL:KJF38469.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

853..1083
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF38463.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1088..1789
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR4_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KJF38464.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1906..2397
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83019.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000M1_scaffold_2128_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2394..3575
DNA (1182bp) protein (394aa)
TraG/TraD family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR6_9CLOT
Conjugal transfer protein TraG {ECO:0000313|EMBL:KJF38466.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Type IV secretory pathway, VirD4 components
L2_026_000M1_scaffold_2128_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3559..3912
DNA (354bp) protein (118aa)
TraG/TraD family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR6_9CLOT
Conjugal transfer protein TraG {ECO:0000313|EMBL:KJF38466.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
TRAG family protein
L2_026_000M1_scaffold_2128_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4024..4236
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR7_9CLOT
Conjugal transfer protein {ECO:0000313|EMBL:KJF39138.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4325..4537
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR7_9CLOT
Conjugal transfer protein {ECO:0000313|EMBL:KJF39138.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4575..5444
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLR9_9CLOT
Membrane protein {ECO:0000313|EMBL:KJF39091.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5460..6146
DNA (687bp) protein (229aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
MT-A70 n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS0_9CLOT
MT-A70 {ECO:0000313|EMBL:EEA83024.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_026_000M1_scaffold_2128_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6365..8233
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS3_9CLOT
Conjugal transfer protein TraE {ECO:0000313|EMBL:KJF39093.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Domain of unknown function DUF87.
L2_026_000M1_scaffold_2128_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8202..8540
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83027.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
TrsE-like protein
L2_026_000M1_scaffold_2128_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8555..9181
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS4_9CLOT
Nitrogen fixation protein {ECO:0000313|EMBL:KJF39094.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9182..10165
DNA (984bp) protein (328aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA modification methylase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS5_9CLOT
L2_026_000M1_scaffold_2128_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10165..12018
DNA (1854bp) protein (618aa)
NlpC/P60 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS6_9CLOT
Peptidase M23 {ECO:0000313|EMBL:KJF39095.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_026_000M1_scaffold_2128_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11957..12307
DNA (351bp) protein (117aa)
NlpC/P60 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS6_9CLOT
Peptidase M23 {ECO:0000313|EMBL:KJF39095.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_026_000M1_scaffold_2128_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12325..12570
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83031.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000M1_scaffold_2128_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12563..13285
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS8_9CLOT
Bacteriocin {ECO:0000313|EMBL:KJF39096.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13282..14271
DNA (990bp) protein (330aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS9_9CLOT
L2_026_000M1_scaffold_2128_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14259..15188
DNA (930bp) protein (310aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
topB; DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLS9_9CLOT
L2_026_000M1_scaffold_2128_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15185..15940
DNA (756bp) protein (252aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJY0_9FIRM
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:KJF39098.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
L2_026_000M1_scaffold_2128_23
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15956..17785
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLT0_9CLOT
Antirestriction protein {ECO:0000313|EMBL:KJF39099.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Antirestriction protein
L2_026_000M1_scaffold_2128_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17791..19062
DNA (1272bp) protein (424aa)
MutS domain I protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLI8_9CLOT
MutS domain I protein {ECO:0000313|EMBL:EEA83035.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
MutS domain I.
L2_026_000M1_scaffold_2128_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19065..19277
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39100.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_26
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19291..21048
DNA (1758bp) protein (586aa)
Antirestriction protein ArdA n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ0_9CLOT
Antirestriction protein {ECO:0000313|EMBL:KJF39101.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Antirestriction protein (ArdA).
L2_026_000M1_scaffold_2128_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21499..21867
DNA (369bp) protein (123aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ1_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEA83038.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator
L2_026_000M1_scaffold_2128_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22007..22528
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83039.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000M1_scaffold_2128_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22596..23195)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF39103.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_026_000M1_scaffold_2128_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23213..24664)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83041.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protein of unknown function DUF88.
Displaying items 1-30 of 31 in total

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