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L2_026_000M1_scaffold_2167

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_2167_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1524..1646
-----------------
DNA (123bp)
protein (41aa)
Integrase n=12 Tax=Bacteroidales RepID=A7ALV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85970.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
integrase
L2_026_000M1_scaffold_2167_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1671..2096
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y6N5_BACSE
transposase
Uncharacterized protein {ECO:0000313|EMBL:EOS04549.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_026_000M1_scaffold_2167_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2615..3154)
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZLP8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04548.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
flavodoxin
L2_026_000M1_scaffold_2167_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3197..4228)
-----------------
DNA (1032bp)
protein (344aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A7ALW2_9PORP
alpha/beta hydrolase
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EXY89039.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_026_000M1_scaffold_2167_5
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4236..5408)
-----------------
DNA (1173bp)
protein (391aa)
Tat pathway signal sequence domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2H0_BACPM
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:EFV28193.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
L2_026_000M1_scaffold_2167_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5535..6092)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8VZG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY89018.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L2_026_000M1_scaffold_2167_7
unknown

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comp(6114..6221)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

L2_026_000M1_scaffold_2167_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6322..6630)
-----------------
DNA (309bp)
protein (103aa)
Cyclic nucleotide-binding domain protein n=10 Tax=Bacteroidales RepID=A7ALW6_9PORP
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EXY89034.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
cyclic nucleotide-binding protein
L2_026_000M1_scaffold_2167_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6662..6769)
-----------------
DNA (108bp)
protein (36aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A8Q0_BACTN
cyclic nucleotide-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77162.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L2_026_000M1_scaffold_2167_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6779..8395)
-----------------
DNA (1617bp)
protein (539aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L604_BACV8
membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23622.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_026_000M1_scaffold_2167_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8408..11104)
-----------------
DNA (2697bp)
protein (899aa)
TonB-linked outer membrane protein, SusC/RagA family n=8 Tax=Bacteroides RepID=B5D1A8_BACPM
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDY94948.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
membrane protein
L2_026_000M1_scaffold_2167_12
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12273..13880)
-----------------
DNA (1608bp)
protein (536aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RA78_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52977.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
L2_026_000M1_scaffold_2167_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13905..15059)
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=14 Tax=Bacteroidales RepID=Q8A8P5_BACTN
6-phosphogluconolactonase
Uncharacterized protein {ECO:0000313|EMBL:KDS66530.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_026_000M1_scaffold_2167_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15339..16259
-----------------
DNA (921bp)
protein (307aa)
Transcriptional regulator n=14 Tax=root RepID=Q8A8P4_BACTN
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04538.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_026_000M1_scaffold_2167_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16328..17254)
-----------------
DNA (927bp)
protein (309aa)
integrase n=1 Tax=Bacteroides massiliensis RepID=UPI00036D96F1
integrase
Uncharacterized protein {ECO:0000313|EMBL:EDN84372.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_2167_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17262..18023)
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=15 Tax=root RepID=Q8A8P2_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS31255.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_026_000M1_scaffold_2167_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18053..18223)
-----------------
DNA (171bp)
protein (57aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9QNB7_9BACE
mobilization protein
Uncharacterized protein {ECO:0000313|EMBL:EDN84374.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Displaying 17 items

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