ggKbase home page

L2_026_000M1_scaffold_2526

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_2526_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..231)
DNA (231bp) protein (77aa)
rumA1; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43821.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_026_000M1_scaffold_2526_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(170..1963)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75268.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_026_000M1_scaffold_2526_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2029..2250)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridium clostridioforme RepID=R0CMI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58509.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_026_000M1_scaffold_2526_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2581..2826)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75269.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_026_000M1_scaffold_2526_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2810..3250)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75270.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Sigma-70, region 4.
L2_026_000M1_scaffold_2526_6
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3228..3542)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75271.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_026_000M1_scaffold_2526_7
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3770..4120
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75272.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
putative Xre family DNA-binding protein
L2_026_000M1_scaffold_2526_8
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4224..4562)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75273.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Nucleotidyltransferase domain.
L2_026_000M1_scaffold_2526_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4734..4985
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75274.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Helix-turn-helix.
L2_026_000M1_scaffold_2526_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5019..5450)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75275.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
two-component response regulator
L2_026_000M1_scaffold_2526_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5712..6110
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZBM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17472.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase
L2_026_000M1_scaffold_2526_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6155..6772
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XQ35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17471.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase
L2_026_000M1_scaffold_2526_13
unknown

Not on your lists

comp(6948..7061)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_026_000M1_scaffold_2526_14
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7196..7768)
DNA (573bp) protein (191aa)
Accessory gene regulator B n=1 Tax=Blautia sp. CAG:257 RepID=R5X1E1_9FIRM
Accessory gene regulator B {ECO:0000313|EMBL:CDA06154.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_026_000M1_scaffold_2526_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7812..8849)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J849_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78501.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_026_000M1_scaffold_2526_16
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8871..9251)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WZZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05624.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L2_026_000M1_scaffold_2526_17
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9295..9957)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WS02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06153.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_026_000M1_scaffold_2526_18
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9973..10833)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KQU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45897.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L2_026_000M1_scaffold_2526_19
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10844..11611)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KI44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45896.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L2_026_000M1_scaffold_2526_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11604..11909)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J848_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78500.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_026_000M1_scaffold_2526_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11932..13038)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J849_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78501.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_026_000M1_scaffold_2526_22
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13122..13505)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KHI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45890.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L2_026_000M1_scaffold_2526_23
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13521..13670)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WRZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06148.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L2_026_000M1_scaffold_2526_24
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13808..15085)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XNZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06147.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L2_026_000M1_scaffold_2526_25
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15066..15794)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KXM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78240.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
LytTR family two component transcriptional regulator
L2_026_000M1_scaffold_2526_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15860..16186
DNA (327bp) protein (109aa)
XRE family transcriptional regulator n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B3222D
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI77922.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Helix-turn-helix.
L2_026_000M1_scaffold_2526_27
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16353..16751
DNA (399bp) protein (133aa)
Bacterial mobilisation protein (MobC) n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWQ1_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilisation protein (MobC) {ECO:0000313|EMBL:CBL22054.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_026_000M1_scaffold_2526_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16738..18387
DNA (1650bp) protein (550aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FQL2_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEA81688.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Relaxase/Mobilisation nuclease domain.
L2_026_000M1_scaffold_2526_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18437..19354)
DNA (918bp) protein (306aa)
Abortive infection bacteriophage resistance protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWQ0_9FIRM
Abortive infection bacteriophage resistance protein
Abortive infection bacteriophage resistance protein {ECO:0000313|EMBL:CBL22053.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_026_000M1_scaffold_2526_30
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19502..20416)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75148.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy