ggKbase home page

L2_026_000M1_scaffold_1029

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1029_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86..967
DNA (882bp) protein (294aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Eubacterium rectale RepID=D4JK66_9FIRM
L2_026_000M1_scaffold_1029_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1055..1483
DNA (429bp) protein (143aa)
GntR domain protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGG5_EUBR3
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK94012.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1029_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1665..2732
DNA (1068bp) protein (356aa)
Spore germination protein B1 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGG6_EUBR3
spore germination protein B1
Spore germination protein B1 {ECO:0000313|EMBL:ACR74763.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2692..3018
DNA (327bp) protein (109aa)
Spore germination protein B1 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGG6_EUBR3
spore germination protein B1
Spore germination protein B1 {ECO:0000313|EMBL:ACR74763.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3023..4180
DNA (1158bp) protein (386aa)
Spore germination protein-like protein YndE n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGG7_EUBR3
spore germination protein-like protein YndE
Spore germination protein-like protein YndE {ECO:0000313|EMBL:ACR74764.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_6
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4146..4502
DNA (357bp) protein (119aa)
Spore germination protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMX0_9FIRM
Spore germination protein {ECO:0000313|EMBL:CDC71114.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Spore germination protein.
L2_026_000M1_scaffold_1029_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4554..5189
DNA (636bp) protein (212aa)
Stage II sporulation protein R n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UJZ8_9FIRM
Stage II sporulation protein R {ECO:0000313|EMBL:CDC71117.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
stage II sporulation protein R
L2_026_000M1_scaffold_1029_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5273..5740
DNA (468bp) protein (156aa)
Uncharacterized protein conserved in bacteria n=3 Tax=Eubacterium rectale RepID=D4JK56_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74766.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5871..6404)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGH0_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74767.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6556..9948
DNA (3393bp) protein (1131aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TFW7_9FIRM
arabinogalactan endo-1,4-beta-galactosidase
L2_026_000M1_scaffold_1029_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10058..11317
DNA (1260bp) protein (420aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TCH9_9FIRM
FKBP-type peptidyl-prolyl cis-trans isomerase (Trigger factor) {ECO:0000313|EMBL:CDC71128.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
L2_026_000M1_scaffold_1029_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11376..12767
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UK12_9FIRM
L2_026_000M1_scaffold_1029_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12839..13180
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGH4_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74771.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13515..14885
DNA (1371bp) protein (457aa)
Arylsulfatase regulator (Fe-S oxidoreductase) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TFY5_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:CDC71145.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
arylsulfatase regulator (Fe-S oxidoreductase)
L2_026_000M1_scaffold_1029_15
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14976..17333
DNA (2358bp) protein (786aa)
Protein translocase subunit secF/protein translocase subunit secD n=3 Tax=Eubacterium RepID=D4JK50_9FIRM
protein translocase subunit secF/protein translocase subunit secD
Protein translocase subunit secF/protein translocase subunit secD {ECO:0000313|EMBL:CDC71148.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1029_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17459..17728
DNA (270bp) protein (90aa)
Predicted membrane protein n=2 Tax=Eubacterium RepID=D4JK49_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK93996.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1029_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17865..19169
DNA (1305bp) protein (435aa)
Cyclomaltodextrinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGH9_EUBR3
cyclomaltodextrinase
Cyclomaltodextrinase {ECO:0000313|EMBL:ACR74776.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19177..19602
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TN04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71159.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_026_000M1_scaffold_1029_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19618..20388
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYD3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91071.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_1029_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20622..21380
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.55)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CBK93992.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CBK93992.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
3-hydroxybutyryl-coA dehydratase n=3 Tax=Eubacterium rectale RepID=C4ZGI2_EUBR3
L2_026_000M1_scaffold_1029_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21512..22858
DNA (1347bp) protein (449aa)
Putative efflux protein MATE family n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UK54_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC71172.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
putative efflux protein, MATE family
L2_026_000M1_scaffold_1029_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23308..24255
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYD6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91074.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_1029_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24294..24686
DNA (393bp) protein (131aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TCM4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74784.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24692..25315)
DNA (624bp) protein (208aa)
Transcriptional regulator n=3 Tax=Eubacterium RepID=D4JK41_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDC71180.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1029_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25556..25888
DNA (333bp) protein (111aa)
SCP-2 sterol transfer family n=3 Tax=Eubacterium RepID=D4JK40_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC71183.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1029_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25892..26845
DNA (954bp) protein (318aa)
Hydrolases of the alpha/beta superfamily n=2 Tax=Eubacterium rectale RepID=D4JK39_9FIRM
Hydrolases of the alpha/beta superfamily
Hydrolases of the alpha/beta superfamily {ECO:0000313|EMBL:CBK93986.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1029_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26842..28260
DNA (1419bp) protein (473aa)
Non-ribosomal peptide synthetase, terminal component n=3 Tax=Eubacterium rectale RepID=C4ZGJ2_EUBR3
non-ribosomal peptide synthetase, terminal component
Non-ribosomal peptide synthetase, terminal component {ECO:0000313|EMBL:ACR74789.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1029_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28297..28527
DNA (231bp) protein (77aa)
Acyl carrier protein n=2 Tax=Eubacterium rectale RepID=D4JK37_9FIRM
Acyl carrier protein
Acyl carrier protein {ECO:0000313|EMBL:CBK93984.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1029_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28549..30063
DNA (1515bp) protein (505aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Long-chain acyl-CoA synthetases (AMP-forming) {ECO:0000313|EMBL:CBK93983.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBK93983.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Long-chain acyl-CoA synthetases (AMP-forming) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JK36_9FIRM
L2_026_000M1_scaffold_1029_30
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30355..31413
DNA (1059bp) protein (353aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TN40_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDC71199.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Glycosyltransferases involved in cell wall biogenesis
Displaying items 1-30 of 89 in total

View Taxonomy