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L2_026_000M1_scaffold_1052

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1052_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(270..509)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26440.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_026_000M1_scaffold_1052_2
Haemonchus contortus, Haemonchus, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(809..1264)
DNA (456bp) protein (152aa)
Ankyrin repeat protein, putative n=1 Tax=Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000) RepID=D8ICH7_BRAP9
arp; ankyrin repeat-containing protein
Ankyrin and Death domain containing protein {ECO:0000313|EMBL:CDL94670.1}; TaxID=6289 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus.;" source="Haemonchus contortus (Barber pole worm).;"
L2_026_000M1_scaffold_1052_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(1441..1986)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12970.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_026_000M1_scaffold_1052_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2116..2445)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26407.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DeoR-like helix-turn-helix domain.
L2_026_000M1_scaffold_1052_5
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2446..2829)
DNA (384bp) protein (128aa)
Uncharacterized protein n=10 Tax=Clostridiales RepID=A7VG08_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO57434.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L2_026_000M1_scaffold_1052_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3117..3971
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26409.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_026_000M1_scaffold_1052_7
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4041..4472)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JTY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ83285.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral taxon 113 str. W5053.;"
L2_026_000M1_scaffold_1052_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4885..5079)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26411.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted transcriptional regulator
L2_026_000M1_scaffold_1052_9
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5230..5646)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Dialister RepID=R5SLV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ54775.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
L2_026_000M1_scaffold_1052_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5671..5901)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26413.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Predicted transcriptional regulator
L2_026_000M1_scaffold_1052_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6171..6359
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26414.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
2', 3'-cyclic nucleotide 2'-phosphodiesterase
L2_026_000M1_scaffold_1052_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6718..7194
DNA (477bp) protein (159aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK22_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO26415.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L2_026_000M1_scaffold_1052_13
unknown

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comp(7220..7714)
DNA (495bp) protein (165aa)

This feature has no annotations

L2_026_000M1_scaffold_1052_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7732..8271
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26213.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_026_000M1_scaffold_1052_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8329..8475
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26214.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_026_000M1_scaffold_1052_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8546..10150
DNA (1605bp) protein (535aa)
yokA; resolvase YokA (EC:3.1.-.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26215.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_026_000M1_scaffold_1052_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10150..10902
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26216.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recombinase
L2_026_000M1_scaffold_1052_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10899..12548
DNA (1650bp) protein (550aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26217.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
site-specific recombinase, DNA invertase Pin
L2_026_000M1_scaffold_1052_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12545..13291
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26218.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_026_000M1_scaffold_1052_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13549..14187
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26219.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_026_000M1_scaffold_1052_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14872..15330
DNA (459bp) protein (153aa)
low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26220.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_026_000M1_scaffold_1052_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15349..16230
DNA (882bp) protein (294aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54385.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_026_000M1_scaffold_1052_23
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16582..17889)
DNA (1308bp) protein (436aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TTN6_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDC73164.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
glycosyltransferase
L2_026_000M1_scaffold_1052_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18113..18328)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46184.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Dimethylmenaquinone methyltransferase
L2_026_000M1_scaffold_1052_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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18471..18731
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46189.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_026_000M1_scaffold_1052_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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18750..19508
DNA (759bp) protein (253aa)
UPF0271 protein HMPREF0866_02345 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFH0_9FIRM
UPF0271 protein HMPREF0866_02345 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized proteins, homologs of lactam utilization protein B
L2_026_000M1_scaffold_1052_27
unknown

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comp(19459..19965)
DNA (507bp) protein (169aa)

This feature has no annotations

L2_026_000M1_scaffold_1052_28
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20055..21464)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LL36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56457.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
integrase family protein
L2_026_000M1_scaffold_1052_29
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21486..21692)
DNA (207bp) protein (69aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LDJ0_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOS56456.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
excisionase family DNA binding domain-containing protein
L2_026_000M1_scaffold_1052_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21834..22130)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZLU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05818.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
Displaying 30 items

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