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L2_026_000M1_scaffold_1659

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1659_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81..824)
DNA (744bp) protein (248aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A6BG89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC74347.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1659_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(965..1348)
DNA (384bp) protein (128aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R6U2M3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC74346.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1659_3
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1323..2822)
DNA (1500bp) protein (500aa)
Site-specific recombinase XerD n=4 Tax=Clostridiales RepID=D4J610_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK79781.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_026_000M1_scaffold_1659_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2812..4542)
DNA (1731bp) protein (577aa)
Site-specific recombinase, phage integrase family n=3 Tax=Clostridiales RepID=C0FUE0_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG93809.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Site-specific recombinase XerD
L2_026_000M1_scaffold_1659_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4571..5695)
DNA (1125bp) protein (375aa)
Site-specific recombinase XerD n=4 Tax=Clostridiales RepID=D4J609_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CDC74341.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1659_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5851..7818)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93812.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Rad3-related DNA helicases
L2_026_000M1_scaffold_1659_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8353..8787)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93813.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Bacterial regulatory proteins, luxR family.
L2_026_000M1_scaffold_1659_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9115..9603)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94767.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_026_000M1_scaffold_1659_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9590..10450)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94766.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_026_000M1_scaffold_1659_10
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10517..12028)
DNA (1512bp) protein (504aa)
RHS repeat-associated core domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRL4_9FIRM
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EEG94764.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Rhs family protein
L2_026_000M1_scaffold_1659_11
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12075..19556)
DNA (7482bp) protein (2494aa)
Rhs family protein n=3 Tax=root RepID=D4J5Z0_9FIRM
Rhs family protein {ECO:0000313|EMBL:CBK79761.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Rhs family protein
L2_026_000M1_scaffold_1659_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19748..21022)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94762.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_026_000M1_scaffold_1659_13
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21019..21732)
DNA (714bp) protein (238aa)
Response regulator of the LytR/AlgR family n=1 Tax=Coprococcus catus GD/7 RepID=D4J5Y8_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK79759.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_026_000M1_scaffold_1659_14
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22136..22696)
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A6BGA3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79758.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_026_000M1_scaffold_1659_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22777..24819)
DNA (2043bp) protein (681aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=D4J5Y6_9FIRM
Domain of unknown function (DUF1906)./Putative peptidoglycan binding domain.
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EEG94758.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_026_000M1_scaffold_1659_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25031..26722)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A6BGA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94757.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
CHAP domain.
L2_026_000M1_scaffold_1659_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26752..27102)
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=root RepID=A6BGA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94756.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_026_000M1_scaffold_1659_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27102..29432)
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63318.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Domain of unknown function DUF87.
L2_026_000M1_scaffold_1659_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29425..29865)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15387.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_026_000M1_scaffold_1659_20
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29869..30300)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A6BGA9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79753.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_026_000M1_scaffold_1659_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30306..31148)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15385.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_026_000M1_scaffold_1659_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31236..31610)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=V8BJR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15384.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_026_000M1_scaffold_1659_23
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31641..33236)
DNA (1596bp) protein (532aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77056.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Type IV secretory pathway, VirD4 components
L2_026_000M1_scaffold_1659_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33203..33511)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BKQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15375.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_026_000M1_scaffold_1659_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33528..33839)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A6BGB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA80379.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000M1_scaffold_1659_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33923..34915)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80380.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000M1_scaffold_1659_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34915..35721)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80381.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_026_000M1_scaffold_1659_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35724..37007)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BLK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15371.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Relaxase/Mobilisation nuclease domain.
L2_026_000M1_scaffold_1659_29
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37014..37322)
DNA (309bp) protein (103aa)
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family n=1 Tax=Coprococcus catus GD/7 RepID=D4J5X7_9FIRM
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:CBK79748.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_026_000M1_scaffold_1659_30
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37301..37477)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J5X6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79747.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Displaying items 1-30 of 47 in total

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