ggKbase home page

L2_026_000M1_scaffold_1737

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1737_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=4 Tax=Eubacterium RepID=C4ZHY8_EUBR3
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1737_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(335..1726)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATP synthase subunit beta n=2 Tax=Eubacterium RepID=C4ZHY9_EUBR3
F0F1 ATP synthase subunit beta
L2_026_000M1_scaffold_1737_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1735..2625)
DNA (891bp) protein (297aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=3 Tax=Eubacterium rectale RepID=C4ZHZ0_EUBR3
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1737_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2637..4136)
DNA (1500bp) protein (500aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
ATP synthase subunit alpha n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHZ1_EUBR3
ATP synthase F1, alpha subunit
L2_026_000M1_scaffold_1737_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4142..4660)
DNA (519bp) protein (173aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Eubacterium rectale RepID=C4ZHZ2_EUBR3
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1737_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4638..5090)
DNA (453bp) protein (151aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=4 Tax=Eubacterium RepID=C4ZHZ3_EUBR3
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1737_7
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5146..5376)
DNA (231bp) protein (77aa)
ATP synthase F0 subcomplex C subunit n=5 Tax=Clostridiales RepID=D4JHH7_9FIRM
hypothetical protein
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L2_026_000M1_scaffold_1737_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5514..6200)
DNA (687bp) protein (229aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=4 Tax=Eubacterium RepID=C4ZHZ5_EUBR3
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1737_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6671..7450)
DNA (780bp) protein (260aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U1T3_9FIRM
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CDC74056.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Predicted divalent heavy-metal cations transporter
L2_026_000M1_scaffold_1737_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7874..9130)
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3R3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90053.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_1737_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9249..10526)
DNA (1278bp) protein (426aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPG8_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CDC74060.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_026_000M1_scaffold_1737_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10539..10922)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UTN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74062.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_026_000M1_scaffold_1737_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11708..12991
DNA (1284bp) protein (428aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Dihydroorotase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TW91_9FIRM
pyrC; dihydroorotase
L2_026_000M1_scaffold_1737_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13053..13205)
DNA (153bp) protein (51aa)
Sensory transduction protein kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI03_EUBR3
sensory transduction protein kinase
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK93085.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1737_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13581..15653)
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84037.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
protein kinase
L2_026_000M1_scaffold_1737_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15907..16725)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94354.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_026_000M1_scaffold_1737_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16738..17697)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94355.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_026_000M1_scaffold_1737_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17817..19289)
DNA (1473bp) protein (491aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Eubacterium RepID=D4JHI9_9FIRM
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CDC74068.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1737_19
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19401..20345)
DNA (945bp) protein (315aa)
HD-superfamily hydrolase n=3 Tax=Eubacterium RepID=C4ZI05_EUBR3
uncharacterized domain HDIG
HD-superfamily hydrolase {ECO:0000313|EMBL:CDC74071.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1737_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20364..21632)
DNA (1269bp) protein (423aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=2 Tax=Eubacterium RepID=D6E3Q1_9FIRM
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK90041.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_1737_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21725..24055
DNA (2331bp) protein (777aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Endonuclease MutS2 n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3Q0_9FIRM
MutS2 family protein
L2_026_000M1_scaffold_1737_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24107..24808
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=4 Tax=Eubacterium RepID=D4JHJ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76645.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1737_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24812..26251
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Sensory transduction histidine kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI09_EUBR3
sensory transduction histidine kinase
L2_026_000M1_scaffold_1737_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26699..27739)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JHJ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93092.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1737_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27749..29545)
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPJ4_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDC74090.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_1737_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29634..30893)
DNA (1260bp) protein (420aa)
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CBK93094.1}; EC=6.1.1.21 {ECO:0000313|EMBL:CBK93094.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Histidine--tRNA ligase n=3 Tax=Eubacterium RepID=C4ZI13_EUBR3
histidine--tRNA ligase
L2_026_000M1_scaffold_1737_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31541..32674)
DNA (1134bp) protein (378aa)
Extracellular/cell surface DNA-entry nuclease n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI14_EUBR3
extracellular/cell surface DNA-entry nuclease precursor
Extracellular/cell surface DNA-entry nuclease {ECO:0000313|EMBL:ACR76651.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_1737_28
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33630..35099)
DNA (1470bp) protein (490aa)
PTS system N-acetylglucosamine-specific IIB component Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component Glc family (TC 4.A.1.1.2) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TWC3_9FIRM
PTS system N-acetylglucosamine-specific IIB component Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component Glc family (TC 4.A.1.1.2) {ECO:0000313|EMBL:CDC74104.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L2_026_000M1_scaffold_1737_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35183..35662)
DNA (480bp) protein (160aa)
PTS system IIA component, Glc family (TC 4.A.1) n=2 Tax=Eubacterium RepID=D4JHK0_9FIRM
PTS system IIA component, Glc family (TC 4.A.1)
PTS system IIA component, Glc family (TC 4.A.1) {ECO:0000313|EMBL:CBK93097.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_1737_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35656..35967)
DNA (312bp) protein (104aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI18_EUBR3
Displaying 30 items

View Taxonomy