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L2_026_000M1_scaffold_1862

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_1862_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..2096)
DNA (2094bp) protein (698aa)
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=3 Tax=Bacteroides RepID=SYV_BACV8
L2_026_000M1_scaffold_1862_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2207..2992
DNA (786bp) protein (262aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3G8_BACV8
MazG family protein {ECO:0000313|EMBL:KDS56706.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_026_000M1_scaffold_1862_3
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3186..4916)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P253_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18368.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L2_026_000M1_scaffold_1862_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4940..8101)
DNA (3162bp) protein (1054aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HWG8_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS56704.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_026_000M1_scaffold_1862_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8375..8821)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05499.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_026_000M1_scaffold_1862_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8833..9210)
DNA (378bp) protein (126aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3PZH4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05500.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_026_000M1_scaffold_1862_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9255..9806)
DNA (552bp) protein (184aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HNY5_BACVU
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS05501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
RNA polymerase sigma70 factor
L2_026_000M1_scaffold_1862_8
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9840..10667)
DNA (828bp) protein (276aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Ribonuclease Z n=14 Tax=root RepID=B6W2P0_9BACE
ribonuclease Z
L2_026_000M1_scaffold_1862_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10840..11286)
DNA (447bp) protein (149aa)
Cold-shock DNA-binding domain protein n=7 Tax=Bacteroides RepID=C6Z644_9BACE
cold shock protein, DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_026_000M1_scaffold_1862_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11536..13332)
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=6 Tax=Bacteroides RepID=A6L3H5_BACV8
30S ribosomal protein S1 {ECO:0000313|EMBL:AII62724.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
rpsA; 30S ribosomal protein S1
L2_026_000M1_scaffold_1862_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13366..13503)
DNA (138bp) protein (46aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UML6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82596.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_026_000M1_scaffold_1862_12
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13576..14352
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A4D1_BACVU
Two-component system sensor histidine kinase {ECO:0000313|EMBL:EFV66649.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
two-component system sensor histidine kinase
L2_026_000M1_scaffold_1862_13
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14365..15036
DNA (672bp) protein (224aa)
Two-component system sensor histidine kinase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P093_9BACE
Two-component system sensor histidine kinase {ECO:0000313|EMBL:CDF18376.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
two-component system sensor histidine kinase
L2_026_000M1_scaffold_1862_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15033..15575)
DNA (543bp) protein (181aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56697.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_026_000M1_scaffold_1862_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15579..16415)
DNA (837bp) protein (279aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
N-acetylmuramic acid 6-phosphate etherase n=4 Tax=Bacteroides RepID=C6Z648_9BACE
murQ; N-acetylmuramic acid 6-phosphate etherase
L2_026_000M1_scaffold_1862_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16412..17251)
DNA (840bp) protein (280aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z649_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16358.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_026_000M1_scaffold_1862_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17407..17961)
DNA (555bp) protein (185aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEB1_BACVU
LytTr DNA-binding domain protein {ECO:0000313|EMBL:KDS30466.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
two-component system response regulator
L2_026_000M1_scaffold_1862_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17982..18191)
DNA (210bp) protein (70aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VEB1_BACVU
Response regulator {ECO:0000313|EMBL:KDS30465.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
two-component system response regulator
L2_026_000M1_scaffold_1862_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18184..19227)
DNA (1044bp) protein (348aa)
Histidine kinase n=7 Tax=Bacteroides RepID=C6Z651_9BACE
Histidine kinase {ECO:0000313|EMBL:EET16360.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor kinase
L2_026_000M1_scaffold_1862_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19344..19982)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3I1_BACV8
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS30463.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_026_000M1_scaffold_1862_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19995..20627)
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3I2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66656.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_026_000M1_scaffold_1862_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20653..21210)
DNA (558bp) protein (186aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3I3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82586.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_026_000M1_scaffold_1862_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21447..22001)
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3I4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18384.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying 23 items

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