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L2_026_000M1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_2_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

475..1065
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A906_9PORP
Putative ATP synthase, subunit E {ECO:0000313|EMBL:EDN86863.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP synthase subunit E
L2_026_000M1_scaffold_2_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1067..1936
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL87_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14572.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_2_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2023..3780
DNA (1758bp) protein (586aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
V-type ATP synthase subunit A (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSR8_9PORP
L2_026_000M1_scaffold_2_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3789..5108
DNA (1320bp) protein (440aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
ATP synthase alpha/beta family, nucleotide-binding domain protein n=4 Tax=Parabacteroides RepID=A7AFN4_9PORP
ATP synthase alpha/beta family, nucleotide-binding domain protein {ECO:0000313|EMBL:EDN86860.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_2_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5184..5807
DNA (624bp) protein (208aa)
V-type ATPase, D subunit {ECO:0000313|EMBL:EEC96914.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EEC96914.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATPase, D subunit n=4 Tax=Parabacteroides RepID=A7AFN3_9PORP
L2_026_000M1_scaffold_2_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5804..7624
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFQ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14568.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
V-type ATPase subunit I
L2_026_000M1_scaffold_2_7
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7701..8153
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YL82_9PORP
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:EOS18943.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
V-type ATPase subunit K
L2_026_000M1_scaffold_2_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8349..10787
DNA (2439bp) protein (813aa)
Peptidase, S9A/B/C family, catalytic domain protein n=3 Tax=Parabacteroides RepID=A7AFN0_9PORP
Peptidase S9A/B/C family catalytic domain protein {ECO:0000313|EMBL:CDD12794.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
dipeptidyl peptidase IV
L2_026_000M1_scaffold_2_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10828..11112)
DNA (285bp) protein (95aa)
DNA-binding protein HU n=4 Tax=Parabacteroides RepID=A7AFM9_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:EDN86855.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA-binding protein HU-beta
L2_026_000M1_scaffold_2_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12415..13251)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14563.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_2_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13660..14034
DNA (375bp) protein (125aa)
Transcriptional regulator, BlaI/MecI/CopY family n=4 Tax=Parabacteroides RepID=A7AFM3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14562.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative regulatory protein
L2_026_000M1_scaffold_2_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14078..15286
DNA (1209bp) protein (403aa)
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSQ6_9PORP
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region {ECO:0000313|EMBL:EKN14561.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_2_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15294..16532
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTA9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14560.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative lipoprotein
L2_026_000M1_scaffold_2_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16636..17613
DNA (978bp) protein (326aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZFU1_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CDD12788.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_026_000M1_scaffold_2_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17691..20186)
DNA (2496bp) protein (832aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFP1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14558.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glycoside hydrolase
L2_026_000M1_scaffold_2_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20391..22085)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL75_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14557.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_2_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22130..24097)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14556.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_2_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24150..25265)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTA4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14555.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
O-succinylbenzoate--CoA ligase
L2_026_000M1_scaffold_2_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25240..26289)
DNA (1050bp) protein (350aa)
O-succinylbenzoate synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFT8_9PORP
O-succinylbenzoate synthase {ECO:0000313|EMBL:EKN14554.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative muconate cycloisomerase
L2_026_000M1_scaffold_2_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26302..27126)
DNA (825bp) protein (275aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=5 Tax=Parabacteroides RepID=A7AFL4_9PORP
L2_026_000M1_scaffold_2_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27164..28828)
DNA (1665bp) protein (555aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL70_9PORP
2-oxoglutarate decarboxylase
L2_026_000M1_scaffold_2_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28992..32858)
DNA (3867bp) protein (1289aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSP7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14551.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative glycosyl hydrolase
L2_026_000M1_scaffold_2_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33169..34032)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14550.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AraC family transcriptional regulator
L2_026_000M1_scaffold_2_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34198..35265
DNA (1068bp) protein (356aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZFT5_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKN14549.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
lipoprotein
L2_026_000M1_scaffold_2_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35265..38393
DNA (3129bp) protein (1043aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFM9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14548.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
multidrug transporter AcrB
L2_026_000M1_scaffold_2_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38393..39760
DNA (1368bp) protein (456aa)
Outer membrane efflux protein n=2 Tax=Parabacteroides merdae RepID=A7AFK9_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN86835.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane efflux protein
L2_026_000M1_scaffold_2_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39920..40951
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86834.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_2_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41009..41290
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0S7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12774.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_026_000M1_scaffold_2_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41856..42941)
DNA (1086bp) protein (362aa)
Permease, YjgP/YjgQ family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFK4_9PORP
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EDN86830.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_2_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42954..44084)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Queuine tRNA-ribosyltransferase n=4 Tax=Parabacteroides RepID=A7AFK3_9PORP
tRNA-guanine transglycosylase
Displaying items 1-30 of 206 in total

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