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L2_026_000M1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_4_1
unknown

Not on your lists

1..99
DNA (99bp) protein (33aa)

This feature has no annotations

L2_026_000M1_scaffold_4_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

154..1056
DNA (903bp) protein (301aa)
Transcriptional regulator n=6 Tax=Bacteroidales RepID=A6LAS2_PARD8
transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS68053.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_026_000M1_scaffold_4_3
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1329..1427
DNA (99bp) protein (33aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AFT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47370.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L2_026_000M1_scaffold_4_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1711..2754)
DNA (1044bp) protein (348aa)
Tyrosine type site-specific recombinase n=2 Tax=Parabacteroides RepID=A6LAS3_PARD8
tyrosine type site-specific recombinase
Uncharacterized protein {ECO:0000313|EMBL:EKN32589.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_026_000M1_scaffold_4_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2860..6096)
DNA (3237bp) protein (1079aa)
Proline dehydrogenase, alpha subunit n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LAS4_PARD8
proline dehydrogenase
Proline dehydrogenase, alpha subunit {ECO:0000313|EMBL:ABR42788.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_000M1_scaffold_4_6
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7018..7326
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AYY7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29051.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_4_7
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7584..8096
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 IPR4_9PORP">RepID=R6IPR4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29052.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_4_8
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8099..8320
DNA (222bp) protein (74aa)
DNA-binding protein n=8 Tax=Bacteroidales RepID=C7X7Q5_9PORP
DNA-binding protein {ECO:0000313|EMBL:EEY84928.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
XRE family transcriptional regulator
L2_026_000M1_scaffold_4_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8677..9027)
DNA (351bp) protein (117aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=E1YVG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62499.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_026_000M1_scaffold_4_10
unknown

Not on your lists

9069..9182
DNA (114bp) protein (38aa)

This feature has no annotations

L2_026_000M1_scaffold_4_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9179..9397
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AZM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29055.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_026_000M1_scaffold_4_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9477..9710)
DNA (234bp) protein (78aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LAS9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42793.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_000M1_scaffold_4_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9876..10757
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZQ04_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29057.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_4_14
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10826..12211)
DNA (1386bp) protein (462aa)
Transglycosylase SLT domain protein n=4 Tax=Bacteroidales RepID=C7X7Y2_9PORP
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EEY84924.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
glycoside hydrolase
L2_026_000M1_scaffold_4_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12224..13636)
DNA (1413bp) protein (471aa)
RNA methyltransferase n=8 Tax=Bacteroidales RepID=A6LAT2_PARD8
RNA methyltransferase
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EKN22544.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L2_026_000M1_scaffold_4_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14265..16985
DNA (2721bp) protein (907aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate,phosphate dikinase n=4 Tax=Parabacteroides RepID=A6LAT3_PARD8
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKN29060.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_026_000M1_scaffold_4_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17366..18460
DNA (1095bp) protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AYZ5_9PORP
two-component system sensor histidine kinase
L2_026_000M1_scaffold_4_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18519..18908
DNA (390bp) protein (130aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LAT5_PARD8
hypothetical protein
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEU52194.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_026_000M1_scaffold_4_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18913..19566
DNA (654bp) protein (218aa)
FHA domain protein n=8 Tax=Bacteroidales RepID=C7X7Y7_9PORP
ABC transporter ATP-binding protein
FHA domain protein {ECO:0000313|EMBL:EEU52195.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_026_000M1_scaffold_4_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19709..19963
DNA (255bp) protein (85aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LAT7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS67555.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_026_000M1_scaffold_4_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19960..20475
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AZN9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29065.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_4_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20488..21291
DNA (804bp) protein (268aa)
Protein phosphatase n=4 Tax=Bacteroidales RepID=D7IQU6_9BACE
serine/threonine phosphatase
Putative serine/threonine phosphatase {ECO:0000313|EMBL:ABR42803.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_000M1_scaffold_4_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21315..23126
DNA (1812bp) protein (604aa)
Protein kinase domain-containing protein n=3 Tax=Bacteroidales RepID=D7IQU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN29067.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
serine/threonine protein kinase
L2_026_000M1_scaffold_4_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23189..24124
DNA (936bp) protein (312aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LAU1_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09786.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_026_000M1_scaffold_4_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24137..26299
DNA (2163bp) protein (721aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LAU2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42806.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_000M1_scaffold_4_26
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26302..27198
DNA (897bp) protein (299aa)
Serine acetyltransferase n=7 Tax=Parabacteroides RepID=A6LAU3_PARD8
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:CDB47347.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L2_026_000M1_scaffold_4_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27273..27671
DNA (399bp) protein (133aa)
NADP-reducing hydrogenase B chain-Desulfovibrio fructosovorans gi|466364|gb|AAA87055.1| potential NAD-reducing hydrogenase subunit n=9 Tax=Bacteroidales RepID=A6LAU4_PARD8
NADP-reducing hydrogenase subunit B
NADP-reducing hydrogenase, subunit B {ECO:0000313|EMBL:EFI09789.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_026_000M1_scaffold_4_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27693..29483
DNA (1791bp) protein (597aa)
NADH:ubiquinone oxidoreductase subunit n=3 Tax=Parabacteroides RepID=A6LAU5_PARD8
NADH:ubiquinone oxidoreductase subunit
Uncharacterized protein {ECO:0000313|EMBL:EKN29072.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_026_000M1_scaffold_4_29
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29498..31288
DNA (1791bp) protein (597aa)
NADH:ubiquinone oxidoreductase subunit n=4 Tax=Parabacteroides RepID=A6LAU6_PARD8
NADH:ubiquinone oxidoreductase subunit
NADH:ubiquinone oxidoreductase subunit {ECO:0000313|EMBL:CDB47344.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L2_026_000M1_scaffold_4_30
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31292..31780
DNA (489bp) protein (163aa)
NADH:ubiquinone oxidoreductase subunit n=9 Tax=Bacteroidales RepID=A6LAU7_PARD8
NADH:ubiquinone oxidoreductase subunit
Putative NAD-dependent formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EEU52206.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Displaying items 1-30 of 235 in total

View Taxonomy