ggKbase home page

L2_026_000M1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_52_1
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..262)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Bacteroides thetaiotaomicron RepID=Q8A817_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03554.1}; Flags: Fragment;; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L2_026_000M1_scaffold_52_2
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(308..880)
DNA (573bp) protein (191aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6ISQ4_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EES66087.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L2_026_000M1_scaffold_52_3
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1433..3139)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6ISQ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES66088.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L2_026_000M1_scaffold_52_4
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3141..3884)
DNA (744bp) protein (248aa)
tRNA/rRNA methyltransferase n=7 Tax=Bacteroides RepID=Q8A814_BACTN
tRNA/rRNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EOS03551.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L2_026_000M1_scaffold_52_5
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3918..5585)
DNA (1668bp) protein (556aa)
DNA repair protein RecN n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6ISQ7_9BACE
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
recombination protein RecN
L2_026_000M1_scaffold_52_6
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5623..6825)
DNA (1203bp) protein (401aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6ISQ8_9BACE
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EES66091.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
flavoprotein
L2_026_000M1_scaffold_52_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6825..7682)
DNA (858bp) protein (286aa)
DNA Pol III Epsilon Chain n=6 Tax=Bacteroides RepID=Q8A811_BACTN
DNA polymerase III subunit epsilon
DNA Pol III Epsilon Chain {ECO:0000313|EMBL:AAO76470.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_026_000M1_scaffold_52_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7738..8862)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
DNA polymerase III subunit beta n=7 Tax=Bacteroides RepID=Q8A810_BACTN
DNA polymerase III subunit beta
L2_026_000M1_scaffold_52_9
uncultured Bacteroides sp. SMG1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9015..9389
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6ISR1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:AFA54799.1}; TaxID=1131818 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="uncultured Bacteroides sp. SMG1.;"
hypothetical protein
L2_026_000M1_scaffold_52_10
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9980..11557)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HQP0_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS03545.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L2_026_000M1_scaffold_52_11
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11641..12399)
DNA (759bp) protein (253aa)
Hydrolase, metal-dependent n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A807_BACTN
hydrolase
Hydrolase, metal-dependent {ECO:0000313|EMBL:AAO76474.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_026_000M1_scaffold_52_12
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12396..13391)
DNA (996bp) protein (332aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Bacteroides RepID=MURB_BACTN
L2_026_000M1_scaffold_52_13
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13411..14259)
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q8A805_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO76476.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_026_000M1_scaffold_52_14
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14256..15212)
DNA (957bp) protein (319aa)
NAD dependent nucleotide-diphosphate-sugar epimerase n=4 Tax=Bacteroides RepID=Q8A804_BACTN
NAD dependent nucleotide-diphosphate-sugar epimerase
Epimerase/reductase {ECO:0000313|EMBL:EFI03818.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L2_026_000M1_scaffold_52_15
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15350..16537
DNA (1188bp) protein (396aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
Glycine C-acetyltransferase n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IF80_9BACE
L2_026_000M1_scaffold_52_16
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16658..17065
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A802_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS03539.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
L2_026_000M1_scaffold_52_17
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17164..17643)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Ferritin A n=4 Tax=Bacteroides RepID=Q8A801_BACTN
ferritin
L2_026_000M1_scaffold_52_18
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17765..18925)
DNA (1161bp) protein (387aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Diaminopimelate decarboxylase n=4 Tax=Bacteroides RepID=DCDA_BACTN
diaminopimelate decarboxylase
L2_026_000M1_scaffold_52_19
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19004..20323)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Aspartokinase n=3 Tax=Bacteroides RepID=Q8A7Z9_BACTN
aspartokinase
L2_026_000M1_scaffold_52_20
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20337..21062)
DNA (726bp) protein (242aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6ISS2_9BACE
ATP-binding protein involved in cell division
Cell-division ATP-binding protein {ECO:0000313|EMBL:EFI03812.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L2_026_000M1_scaffold_52_21
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21047..21658)
DNA (612bp) protein (204aa)
Histidine biosynthesis bifunctional protein HisIE n=4 Tax=Bacteroides RepID=HIS2_BACTN
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L2_026_000M1_scaffold_52_22
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21721..22476)
DNA (756bp) protein (252aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Imidazole glycerol phosphate synthase subunit HisF n=4 Tax=Bacteroides RepID=HIS6_BACTN
imidazole glycerol phosphate synthase subunit HisF
L2_026_000M1_scaffold_52_23
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22584..23303)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteroides RepID=HIS4_BACTN
phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase
L2_026_000M1_scaffold_52_24
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23475..24065)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HIC0_BACT4
hisH; imidazole glycerol phosphate synthase subunit HisH
L2_026_000M1_scaffold_52_25
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24065..24919)
DNA (855bp) protein (285aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
Formyltetrahydrofolate deformylase n=5 Tax=Bacteroides RepID=Q8A7Z3_BACTN
formyltetrahydrofolate deformylase
L2_026_000M1_scaffold_52_26
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25821..26414
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6ISS8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE75957.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L2_026_000M1_scaffold_52_27
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26621..27457)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KJE5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE75956.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
oxidoreductase, aldo/keto reductase
L2_026_000M1_scaffold_52_28
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27609..28028)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KHV9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE75955.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L2_026_000M1_scaffold_52_29
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28122..29000)
DNA (879bp) protein (293aa)
Transcriptional regulator n=2 Tax=Bacteroides RepID=Q8A7Y9_BACTN
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EES66114.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L2_026_000M1_scaffold_52_30
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29124..29672)
DNA (549bp) protein (183aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IF66_9BACE
Cyclic nucleotide-binding domain-containing protein {ECO:0000313|EMBL:EFI03803.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
Displaying items 1-30 of 125 in total

View Taxonomy