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L2_026_000M1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_55_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

535..2595
DNA (2061bp) protein (687aa)
F5/8 type C domain protein n=5 Tax=Parabacteroides RepID=C7XFA0_9PORP
F5/8 type C domain protein {ECO:0000313|EMBL:EFK60296.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
glycoside hydrolase
L2_026_000M1_scaffold_55_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2681..5512)
DNA (2832bp) protein (944aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IXH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50091.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
signal transduction histidine kinase
L2_026_000M1_scaffold_55_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5784..6758)
DNA (975bp) protein (325aa)
Tat pathway signal sequence domain protein n=4 Tax=Bacteroidales RepID=C7XFA2_9PORP
AP endonuclease, family 2 {ECO:0000313|EMBL:EFI06990.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_026_000M1_scaffold_55_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6776..8416)
DNA (1641bp) protein (547aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6APU2_9PORP
carboxylesterase type B
L2_026_000M1_scaffold_55_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8462..10300)
DNA (1839bp) protein (613aa)
Glycoside hydrolase family 13, candidate alpha-glycosidase n=6 Tax=Bacteroidales RepID=A6LFJ3_PARD8
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEU49276.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
glycoside hydrolase family protein
L2_026_000M1_scaffold_55_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10369..11754)
DNA (1386bp) protein (462aa)
SusD family protein n=2 Tax=Parabacteroides RepID=C7XFA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29756.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L2_026_000M1_scaffold_55_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11767..12981)
DNA (1215bp) protein (405aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFJ5_PARD8
hypothetical protein
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS47386.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L2_026_000M1_scaffold_55_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12982..14835)
DNA (1854bp) protein (618aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides sp. 20_3 RepID=E1Z128_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFK60303.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L2_026_000M1_scaffold_55_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14854..16695)
DNA (1842bp) protein (614aa)
Alpha amylase, catalytic domain protein n=5 Tax=Bacteroidales RepID=C7XFA7_9PORP
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFK60304.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
glycoside hydrolase family protein
L2_026_000M1_scaffold_55_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16704..18047)
DNA (1344bp) protein (448aa)
Tat pathway signal sequence domain protein n=5 Tax=Bacteroidales RepID=C7XFA8_9PORP
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKN29753.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
NADH-dependent dyhydrogenase
L2_026_000M1_scaffold_55_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18079..18846)
DNA (768bp) protein (256aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7XFA9_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60306.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_026_000M1_scaffold_55_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19084..23058
DNA (3975bp) protein (1325aa)
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IX84_9BACE
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) {ECO:0000313|EMBL:EFI06982.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component system sensor histidine kinase/response regulator
L2_026_000M1_scaffold_55_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23063..23905)
DNA (843bp) protein (281aa)
LytTr DNA-binding domain protein n=5 Tax=Bacteroidales RepID=D7IX83_9BACE
LytTr DNA-binding domain protein {ECO:0000313|EMBL:KDS71108.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L2_026_000M1_scaffold_55_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24085..25230
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APT3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25610.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_55_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25491..26459)
DNA (969bp) protein (323aa)
Peptide chain release factor 2 n=1 Tax=Parabacteroides sp. D25 RepID=K6AC43_9PORP
Peptide chain release factor 2 {ECO:0000313|EMBL:EKN25609.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
peptide chain release factor RF-2
L2_026_000M1_scaffold_55_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26679..28484)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BC23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25608.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
long-chain-fatty-acid-CoA ligase
L2_026_000M1_scaffold_55_17
unknown

Not on your lists

comp(28557..28649)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_026_000M1_scaffold_55_18
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28672..28998
DNA (327bp) protein (109aa)
Transcriptional regulator, PadR family n=7 Tax=Bacteroidales RepID=D0TJR8_9BACE
Putative PadR-family transcriptional regulatory protein {ECO:0000313|EMBL:CDB50104.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L2_026_000M1_scaffold_55_19
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29011..30123
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25606.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_55_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30365..30760)
DNA (396bp) protein (132aa)
Histidine triad (HIT) family protein n=9 Tax=Bacteroidales RepID=A6LFK6_PARD8
histidine triad (HIT) family protein
Histidine triad (HIT) family protein {ECO:0000313|EMBL:ABR44470.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_000M1_scaffold_55_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30775..31245)
DNA (471bp) protein (157aa)
Transcription elongation factor GreA n=9 Tax=Bacteroidales RepID=A6LFK7_PARD8
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_026_000M1_scaffold_55_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31443..32600)
DNA (1158bp) protein (386aa)
Antioxidant, AhpC/TSA family n=3 Tax=Bacteroidales RepID=C7XFC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25603.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_55_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32804..35044
DNA (2241bp) protein (747aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Polyribonucleotide nucleotidyltransferase n=5 Tax=Parabacteroides RepID=PNP_PARD8
polynucleotide phosphorylase
L2_026_000M1_scaffold_55_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35973..36434)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LFL1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44475.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_026_000M1_scaffold_55_25
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36536..38275)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6APS3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25600.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_55_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38337..39719
DNA (1383bp) protein (461aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6A585_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25599.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_55_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39809..41437)
DNA (1629bp) protein (543aa)
Fumarate hydratase class I, anaerobic n=9 Tax=Bacteroidales RepID=A6LFL4_PARD8
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EKN25598.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
fumarate hydratase class I, anaerobic
L2_026_000M1_scaffold_55_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41563..43812
DNA (2250bp) protein (750aa)
Lysyl endopeptidase n=3 Tax=Parabacteroides RepID=A6LFL5_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EKN25597.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
lysyl endopeptidase
L2_026_000M1_scaffold_55_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44078..45769
DNA (1692bp) protein (564aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AP91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25596.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_026_000M1_scaffold_55_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45979..47733
DNA (1755bp) protein (585aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YX32_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25595.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
Displaying items 1-30 of 94 in total

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