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L2_026_000M1_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_77_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(357..1577)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYQ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12009.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_77_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1732..2748
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=R6WLL7_9PORP
two-component system sensor histidine kinase
L2_026_000M1_scaffold_77_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2745..5429)
DNA (2685bp) protein (895aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y758_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09032.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
acylaminoacyl-peptidase
L2_026_000M1_scaffold_77_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5734..6576
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A030_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09033.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_77_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6571..8262)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0K1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09034.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
sulfatase-modifying factor protein
L2_026_000M1_scaffold_77_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8274..10220)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCV2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09035.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative thiol:disulfide interchange protein DsbE
L2_026_000M1_scaffold_77_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10231..11376)
DNA (1146bp) protein (382aa)
Antioxidant, AhpC/TSA family n=2 Tax=Parabacteroides merdae RepID=A7AE08_9PORP
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDN87300.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alkyl hydroperoxide reductase
L2_026_000M1_scaffold_77_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11516..12190)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BQ29_9PORP
Putative bacteriocin export ABC transporter, lactococcin 972 group {ECO:0000313|EMBL:EDN87299.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative ABC transporter ATP-binding protein
L2_026_000M1_scaffold_77_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12715..13488
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A036_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09038.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
NADH pyrophosphatase
L2_026_000M1_scaffold_77_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13516..15654
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0K5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09039.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
peptidase s9b dipeptidylpeptidase IV domain-containing protein
L2_026_000M1_scaffold_77_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15656..16162)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZCV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11989.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_026_000M1_scaffold_77_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16268..16921)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCB2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09041.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_77_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16928..17980)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y768_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09042.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative thiol:disulfide oxidoreductase
L2_026_000M1_scaffold_77_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18155..20545)
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A041_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09043.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_77_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20586..22910)
DNA (2325bp) protein (775aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0L0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09044.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative ABc transport system, membrane protein
L2_026_000M1_scaffold_77_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22933..25338)
DNA (2406bp) protein (802aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCW3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09045.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
efflux ABC transporter permease
L2_026_000M1_scaffold_77_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25349..26599)
DNA (1251bp) protein (417aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y0H6_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD11982.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_77_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26633..28102)
DNA (1470bp) protein (490aa)
Outer membrane efflux protein n=3 Tax=Parabacteroides merdae RepID=A7ADY7_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN87279.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane protein
L2_026_000M1_scaffold_77_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28848..30212
DNA (1365bp) protein (455aa)
Sigma-54 interaction domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADY5_9PORP
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDN87277.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component system response regulator
L2_026_000M1_scaffold_77_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30209..31210
DNA (1002bp) protein (334aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0L4_9PORP
two-component system sensor histidine kinase
L2_026_000M1_scaffold_77_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31176..33560)
DNA (2385bp) protein (795aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09050.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
integral membrane sensor signal transduction histidine kinase
L2_026_000M1_scaffold_77_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33660..36050)
DNA (2391bp) protein (797aa)
TonB-dependent receptor n=2 Tax=Parabacteroides RepID=A7ADY2_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN87274.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB dependent outer membrane protein
L2_026_000M1_scaffold_77_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36131..36811
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ADY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87273.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_77_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36806..37120)
DNA (315bp) protein (105aa)
Thioredoxin n=6 Tax=Parabacteroides RepID=A7ADY0_9PORP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
thioredoxin
L2_026_000M1_scaffold_77_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37189..40989)
DNA (3801bp) protein (1267aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
DNA polymerase III, alpha subunit n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z0L8_9PORP
DNA polymerase III subunit alpha
L2_026_000M1_scaffold_77_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41117..41746
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=K5ZCX0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87270.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_77_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


42078..42533
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=6 Tax=Parabacteroides RepID=A7ADX7_9PORP
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rplM; 50S ribosomal protein L13
L2_026_000M1_scaffold_77_28
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


42539..42925
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=6 Tax=Parabacteroides RepID=A7ADX6_9PORP
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
rpsI; 30S ribosomal protein S9
L2_026_000M1_scaffold_77_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


43067..43909
DNA (843bp) protein (281aa)
30S ribosomal protein S2 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A056_9PORP
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rpsB; 30S ribosomal protein S2
L2_026_000M1_scaffold_77_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44059..45048
DNA (990bp) protein (330aa)
Elongation factor Ts n=4 Tax=Parabacteroides RepID=A7ADX4_9PORP
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tsf; elongation factor Ts
Displaying items 1-30 of 104 in total

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