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L2_026_000M1_scaffold_94

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_94_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(240..413)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BEM8_9PORP
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EKN11565.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_94_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(616..2001)
DNA (1386bp) protein (462aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7A9Y9_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN88446.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_94_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2013..3728)
DNA (1716bp) protein (572aa)
SusD family protein n=3 Tax=Parabacteroides merdae RepID=A7A9Z0_9PORP
SusD family protein {ECO:0000313|EMBL:EDN88447.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RagB/SusD domain-containing protein
L2_026_000M1_scaffold_94_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3742..6978)
DNA (3237bp) protein (1079aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7W3_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD15179.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_94_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7135..8130)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YHR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13177.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma factor
L2_026_000M1_scaffold_94_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8284..8838)
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y9R7_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD15177.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase ECF-type sigma factor
L2_026_000M1_scaffold_94_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8947..9375
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9Z5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88452.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_94_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9441..11381
DNA (1941bp) protein (647aa)
Cadmium-exporting ATPase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0T2_9PORP
Cadmium-exporting ATPase {ECO:0000313|EMBL:CDD15175.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cation-transporting ATPase
L2_026_000M1_scaffold_94_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11563..12546)
DNA (984bp) protein (328aa)
Glycosyl hydrolase family 43 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5C0_9PORP
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDD11426.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-fructosidase, levanase/invertase
L2_026_000M1_scaffold_94_10
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12660..14999)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C8V0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31099.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases
L2_026_000M1_scaffold_94_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15086..16627)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MMA3_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD05156.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
L2_026_000M1_scaffold_94_12
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16640..19861)
DNA (3222bp) protein (1074aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P1X5_9SPHI
Putative outer membrane protein {ECO:0000313|EMBL:CDS92941.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
L2_026_000M1_scaffold_94_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19910..20908)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 PF0_9PORP">RepID=K5ZPF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13185.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Fe2+-dicitrate sensor, membrane component
L2_026_000M1_scaffold_94_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21005..21619)
DNA (615bp) protein (205aa)
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides merdae RepID=A7AA02_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN88459.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L2_026_000M1_scaffold_94_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21625..22524)
DNA (900bp) protein (300aa)
alkaline phosphatase (EC:3.1.3.1)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5YHR9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13187.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_94_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22619..23404
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B617_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98135.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_026_000M1_scaffold_94_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23833..24783)
DNA (951bp) protein (317aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides merdae RepID=A7AA11_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN88468.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-sigma factor
L2_026_000M1_scaffold_94_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24816..26804)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WR15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13778.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_026_000M1_scaffold_94_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26906..27460)
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNW1_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN13196.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L2_026_000M1_scaffold_94_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27595..29190)
DNA (1596bp) protein (532aa)
putative alpha-glucosidase II (EC:3.2.1.20)
Glycosyl hydrolase, family 31 n=2 Tax=Parabacteroides merdae RepID=A7AA14_9PORP
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:EDN88471.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_94_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29212..31368)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6ABZ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13198.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative alpha-N-acetylglucosaminidase
L2_026_000M1_scaffold_94_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31365..32936)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZC22_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13199.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_94_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32938..34125)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZPG8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13200.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glycoside hydrolase
L2_026_000M1_scaffold_94_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34210..35682)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNW6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13201.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
frrH; putative outer membrane protein
L2_026_000M1_scaffold_94_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35715..39194)
DNA (3480bp) protein (1160aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YHT2_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN13202.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
frrG; putative outer membrane protein
L2_026_000M1_scaffold_94_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39353..40333)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6ABZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13203.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-FecI sigma factor FecR
L2_026_000M1_scaffold_94_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40982..41524)
DNA (543bp) protein (181aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZC27_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN13204.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_026_000M1_scaffold_94_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41552..44701)
DNA (3150bp) protein (1050aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZPH4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13205.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_94_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44829..45755
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNX1_9PORP
riboflavin biosynthesis protein RibF
L2_026_000M1_scaffold_94_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45765..46820
DNA (1056bp) protein (352aa)
Peptidase dimerization domain protein n=2 Tax=Parabacteroides merdae RepID=A7AA24_9PORP
Peptidase dimerization domain protein {ECO:0000313|EMBL:EDN88481.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetylornithine deacetylase
Displaying items 1-30 of 74 in total

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