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L2_026_000M1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_122_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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715..1212
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DZR0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92073.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_122_2
unknown

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1209..1334
DNA (126bp) protein (42aa)

This feature has no annotations

L2_026_000M1_scaffold_122_3
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1316..2695
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77673.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L2_026_000M1_scaffold_122_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2673..3953
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36973.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_122_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4107..5498
DNA (1392bp) protein (464aa)
Fatty-acyl-CoA synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBD6_9FIRM
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:CDE36974.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
fatty-acyl-CoA synthase
L2_026_000M1_scaffold_122_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5647..6942)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36975.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_122_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7521..7724
DNA (204bp) protein (68aa)
Protein translocase subunit SecE n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB2_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_122_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7740..8276
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFJ4_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional antiterminator NusG
L2_026_000M1_scaffold_122_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8404..8829
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDD5_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
50S ribosomal protein L11
L2_026_000M1_scaffold_122_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8906..9601
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBE1_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
50S ribosomal protein L1
L2_026_000M1_scaffold_122_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9887..10381
DNA (495bp) protein (165aa)
50S ribosomal protein L10 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC59_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
large subunit ribosomal protein L10
L2_026_000M1_scaffold_122_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10493..10858
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB7_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rplL; 50S ribosomal protein L7/L12
L2_026_000M1_scaffold_122_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11204..15160
DNA (3957bp) protein (1319aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFJ9_9FIRM
DNA-directed RNA polymerase
L2_026_000M1_scaffold_122_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15178..18858
DNA (3681bp) protein (1227aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDE1_9FIRM
DNA-directed RNA polymerase subunit beta'
L2_026_000M1_scaffold_122_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19119..19538
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBE8_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rpsL; 30S ribosomal protein S12
L2_026_000M1_scaffold_122_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19728..20279
DNA (552bp) protein (184aa)
30S ribosomal protein S7 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC64_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
30S ribosomal protein S7
L2_026_000M1_scaffold_122_17
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20300..22462
DNA (2163bp) protein (721aa)
Elongation factor G n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2R8_EUBE2
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
elongation factor G
L2_026_000M1_scaffold_122_18
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22567..23760
DNA (1194bp) protein (398aa)
Elongation factor Tu n=3 Tax=Eubacterium RepID=EFTU_EUBE2
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L2_026_000M1_scaffold_122_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23867..25885)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36280.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_122_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26227..26523
DNA (297bp) protein (99aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAF8_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CDE36281.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_026_000M1_scaffold_122_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26631..27731
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36282.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_026_000M1_scaffold_122_22
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27722..27970
DNA (249bp) protein (83aa)
DNA or RNA helicases of superfamily II n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NGR8_9FIRM
DNA or RNA helicases of superfamily II {ECO:0000313|EMBL:CCZ03365.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
DNA or RNA helicases of superfamily II
L2_026_000M1_scaffold_122_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27934..28287
DNA (354bp) protein (118aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZT5_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL12875.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_026_000M1_scaffold_122_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28294..29133
DNA (840bp) protein (280aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZT5_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL12875.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_026_000M1_scaffold_122_25
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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29221..29499
DNA (279bp) protein (93aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJY1_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CDD65438.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
XRE family transcriptional regulator
L2_026_000M1_scaffold_122_26
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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29529..30734
DNA (1206bp) protein (402aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;"
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=4 Tax=Vibrio cholerae RepID=J1XSQ2_VIBCL
L2_026_000M1_scaffold_122_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30736..32847
DNA (2112bp) protein (704aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27584.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_026_000M1_scaffold_122_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32857..35310
DNA (2454bp) protein (818aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M5_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL27585.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_026_000M1_scaffold_122_29
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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35324..35770
DNA (447bp) protein (149aa)
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EET62936.1}; EC=3.1.-.- {ECO:0000313|EMBL:EET62936.1};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
DNA mismatch endonuclease Vsr n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9J7_9FIRM
very short patch repair endonuclease, putative
L2_026_000M1_scaffold_122_30
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35966..37381
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IS58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24745.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
site-specific DNA-methyltransferase restriction-modification protein
Displaying items 1-30 of 97 in total

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