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L2_026_000M1_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_125_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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170..1369
DNA (1200bp) protein (400aa)
Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKD1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFB76852.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_125_2

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comp(1429..3870)
DNA (2442bp) protein (814aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=uncultured bacterium scaffold00056 RepID=I7ARK7_9BACT
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:AFN84577.1}; TaxID=1132475 species="Bacteria; environmental samples.;" source="uncultured bacterium scaffold00056.;"
L2_026_000M1_scaffold_125_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4474..5670
DNA (1197bp) protein (399aa)
Transporter, CPA2 family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZG52_9FIRM
Transporter, CPA2 family {ECO:0000313|EMBL:EFQ07833.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L2_026_000M1_scaffold_125_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5783..6412)
DNA (630bp) protein (210aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLH9_9FIRM
L2_026_000M1_scaffold_125_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6425..6904)
DNA (480bp) protein (160aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLH8_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EFB76444.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_125_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6935..7210)
DNA (276bp) protein (92aa)
Putative sporulation transcriptional regulator SpoIIID n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLH7_9FIRM
Putative sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EFB76443.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Stage III sporulation protein D.
L2_026_000M1_scaffold_125_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7272..9146)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75756.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_125_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9289..10203)
DNA (915bp) protein (305aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6L3_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDP19801.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_026_000M1_scaffold_125_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10310..11041
DNA (732bp) protein (244aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG8_9FIRM
L2_026_000M1_scaffold_125_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11044..11463
DNA (420bp) protein (140aa)
Cytidine deaminase {ECO:0000313|EMBL:EFB75752.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EFB75752.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Cytidine deaminase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG7_9FIRM
cytidine deaminase, homotetrameric
L2_026_000M1_scaffold_125_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11632..12795
DNA (1164bp) protein (388aa)
Basic membrane protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG6_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EFB75751.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Bmp family protein
L2_026_000M1_scaffold_125_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13008..14141
DNA (1134bp) protein (378aa)
Basic membrane protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG4_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EFB75750.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Bmp family protein
L2_026_000M1_scaffold_125_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14325..15863
DNA (1539bp) protein (513aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB75748.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC transporter-like protein
L2_026_000M1_scaffold_125_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15860..16975
DNA (1116bp) protein (372aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG1_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFB75746.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC transporter permease
L2_026_000M1_scaffold_125_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16972..17964
DNA (993bp) protein (331aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMG0_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFB75745.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
inner-membrane translocator
L2_026_000M1_scaffold_125_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18031..19353
DNA (1323bp) protein (441aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EFB75744.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EFB75744.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
thymidine phosphorylase (EC:2.4.2.2 2.4.2.4)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF9_9FIRM
L2_026_000M1_scaffold_125_17
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19428..20057)
DNA (630bp) protein (210aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2S3_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX49548.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_026_000M1_scaffold_125_18

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comp(20035..21021)
DNA (987bp) protein (329aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Protein containing ATP-binding region, ATPase-like domain protein n=1 Tax=human gut metagenome RepID=K1SK75_9ZZZZ
Protein containing ATP-binding region, ATPase-like domain protein {ECO:0000313|EMBL:EKC60987.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_026_000M1_scaffold_125_19

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comp(21018..22664)
DNA (1647bp) protein (549aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TYC5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC74933.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_125_20

Not on your lists

22867..23253
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TS50_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC62206.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_026_000M1_scaffold_125_21
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23271..23999
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Streptococcus henryi RepID=UPI00036136B3
Uncharacterized protein {ECO:0000313|EMBL:ETP71849.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L2_026_000M1_scaffold_125_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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24084..25667
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82274.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_026_000M1_scaffold_125_23
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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25710..27467
DNA (1758bp) protein (586aa)
FHA domain containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW08_ROSS1
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ABQ90811.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
L2_026_000M1_scaffold_125_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

27532..28845
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J094_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42426.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Putative virion core protein (lumpy skin disease virus)
L2_026_000M1_scaffold_125_25
unknown

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28845..29333
DNA (489bp) protein (163aa)

This feature has no annotations

L2_026_000M1_scaffold_125_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29333..30409
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H304_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97738.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_026_000M1_scaffold_125_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30426..31217
DNA (792bp) protein (264aa)
Beta-propeller domains of methanol dehydrogenase type n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QHI0_9FIRM
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:CDC30361.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Beta-propeller domains of methanol dehydrogenase type
L2_026_000M1_scaffold_125_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31380..31769)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75743.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_125_29
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31949..32683)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6KX81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78065.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L2_026_000M1_scaffold_125_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32687..33439)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5A8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02767.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 1-30 of 103 in total

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