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L2_026_000M1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_156_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..1013)
DNA (1011bp) protein (337aa)
GTP-binding protein TypA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJN3_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:CDB45546.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
GTP-binding protein TypA
L2_026_000M1_scaffold_156_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1206..2483)
DNA (1278bp) protein (426aa)
TRAP dicarboxylate transporter n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8C1_9FIRM
TRAP dicarboxylate transporter {ECO:0000313|EMBL:CDB45545.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative TRAP dicarboxylate transporter large membrane protein
L2_026_000M1_scaffold_156_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2485..3009)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45544.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative TRAP dicarboxylate transporter small membrane protein
L2_026_000M1_scaffold_156_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3082..4107)
DNA (1026bp) protein (342aa)
TRAP dicarboxylate transporter n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5W4_9FIRM
TRAP dicarboxylate transporter {ECO:0000313|EMBL:CDB45543.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative TRAP dicarboxylate transporter periplasmic protein
L2_026_000M1_scaffold_156_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4128..4994)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45542.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
PEP phosphonomutase-like enzyme
L2_026_000M1_scaffold_156_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5452..5949)
DNA (498bp) protein (166aa)
NlpC/P60 family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJM9_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDB45541.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
NLP/P60 protein
L2_026_000M1_scaffold_156_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5979..7586)
DNA (1608bp) protein (536aa)
Metallo-beta-lactamase domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8B6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDB45540.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
RNA-metabolising metallo-beta-lactamase
L2_026_000M1_scaffold_156_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7689..8912)
DNA (1224bp) protein (408aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG83_9FIRM
ATP-dependent DNA helicase RecQ family {ECO:0000313|EMBL:CDB45539.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_156_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8978..9610)
DNA (633bp) protein (211aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5W2_9FIRM
L2_026_000M1_scaffold_156_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9610..10968)
DNA (1359bp) protein (453aa)
UPF0210 protein BN533_00663 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5F6_9FIRM
UPF0210 protein BN533_00663 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_156_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10979..11248)
DNA (270bp) protein (90aa)
UPF0237 protein BN533_00662 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJM4_9FIRM
UPF0237 protein BN533_00662 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ACT domain-containing protein
L2_026_000M1_scaffold_156_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11396..11920)
DNA (525bp) protein (175aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
3-isopropylmalate dehydratase small subunit (EC:4.2.1.35)
3-isopropylmalate dehydratase small subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8B1_9FIRM
L2_026_000M1_scaffold_156_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11920..13197)
DNA (1278bp) protein (426aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG80_9FIRM
3-isopropylmalate dehydratase large subunit
L2_026_000M1_scaffold_156_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13241..14155)
DNA (915bp) protein (305aa)
Alr0039 protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5V8_9FIRM
Alr0039 protein {ECO:0000313|EMBL:CDB45533.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
alpha/beta hydrolase family protein
L2_026_000M1_scaffold_156_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14329..15207
DNA (879bp) protein (293aa)
Transcriptional regulator LysR family n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5F1_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDB45532.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative LysR family transcriptional regulator
L2_026_000M1_scaffold_156_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15318..15605
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45531.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L2_026_000M1_scaffold_156_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15687..17207)
DNA (1521bp) protein (507aa)
Mg chelatase-like protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8A6_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:CDB45530.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
magnesiumchelatase
L2_026_000M1_scaffold_156_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17227..17583)
DNA (357bp) protein (119aa)
UPF0102 protein BN533_00655 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG76_9FIRM
UPF0102 protein BN533_00655 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L2_026_000M1_scaffold_156_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17580..18389)
DNA (810bp) protein (270aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5V4_9FIRM
L2_026_000M1_scaffold_156_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18430..19293)
DNA (864bp) protein (288aa)
Ribosome biogenesis GTPase A n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5F0_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ribosome biogenesis GTP-binding protein YlqF
L2_026_000M1_scaffold_156_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19315..19869)
DNA (555bp) protein (185aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJL7_9FIRM
L2_026_000M1_scaffold_156_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20195..21088
DNA (894bp) protein (298aa)
Ribokinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8A2_9FIRM
Ribokinase {ECO:0000313|EMBL:CDB45525.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ribokinase
L2_026_000M1_scaffold_156_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21076..21471
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
D-ribose pyranase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG73_9FIRM
transport protein RbsD/FucU
L2_026_000M1_scaffold_156_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21505..22986
DNA (1482bp) protein (494aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Ribose transport ATP-binding protein rbsa n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5V1_9FIRM
ABC transporter
L2_026_000M1_scaffold_156_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22990..23919
DNA (930bp) protein (310aa)
Ribose ABC transporter permease protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5E6_9FIRM
Ribose ABC transporter permease protein {ECO:0000313|EMBL:CDB45522.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
inner-membrane translocator
L2_026_000M1_scaffold_156_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23933..24850
DNA (918bp) protein (306aa)
D-ribose-binding periplasmic protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJL2_9FIRM
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:CDB45521.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
periplasmic binding protein/LacI transcriptional regulator
L2_026_000M1_scaffold_156_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24981..25220)
DNA (240bp) protein (80aa)
DNA-binding helix-turn-helix protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IG68_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB45519.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DNA-binding protein
L2_026_000M1_scaffold_156_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25316..28369)
DNA (3054bp) protein (1018aa)
Autotransporter protease n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I5U7_9FIRM
Autotransporter protease {ECO:0000313|EMBL:CDB45518.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
autotransporter domain protein
L2_026_000M1_scaffold_156_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28468..32565)
DNA (4098bp) protein (1366aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5E4_9FIRM
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:CDB45517.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
triple helix repeat-containing collagen
L2_026_000M1_scaffold_156_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32909..33109)
DNA (201bp) protein (67aa)
Helix-turn-helix domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IF68_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDB45214.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
helix-turn-helix domain-containing protein
Displaying items 1-30 of 80 in total

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