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L2_026_000M1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_162_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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357..1667
DNA (1311bp) protein (437aa)
Chloride transporter, ClC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN62_9FIRM
Chloride transporter, ClC family {ECO:0000313|EMBL:EFB75996.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
voltage gated chloride channel family
L2_026_000M1_scaffold_162_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1748..2935
DNA (1188bp) protein (396aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN64_9FIRM
L2_026_000M1_scaffold_162_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2935..4743
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Elongation factor 4 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN65_9FIRM
GTP-binding protein LepA
L2_026_000M1_scaffold_162_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5064..6212)
DNA (1149bp) protein (383aa)
Lactaldehyde reductase {ECO:0000313|EMBL:EEU96448.1}; EC=1.1.1.77 {ECO:0000313|EMBL:EEU96448.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=2 Tax=root RepID=C7H6C0_9FIRM
L2_026_000M1_scaffold_162_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6550..7173)
DNA (624bp) protein (208aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I4R0_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L2_026_000M1_scaffold_162_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7346..8734)
DNA (1389bp) protein (463aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWS0_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L2_026_000M1_scaffold_162_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8750..10504)
DNA (1755bp) protein (585aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
atpA; V-type ATP synthase alpha chain (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7T3_9FIRM
L2_026_000M1_scaffold_162_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10516..11106)
DNA (591bp) protein (197aa)
Putative ATP synthase subunit E n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IU25_9FIRM
Putative ATP synthase subunit E {ECO:0000313|EMBL:CDB41477.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L2_026_000M1_scaffold_162_9
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11118..11423)
DNA (306bp) protein (102aa)
ATP synthase, subunit F n=3 Tax=Clostridiales RepID=G9YP81_9FIRM
Vacuolar H+transporting two-sector ATPase F subunit
Vacuolar H+transporting two-sector ATPase F subunit {ECO:0000313|EMBL:CDZ24453.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L2_026_000M1_scaffold_162_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11428..11805)
DNA (378bp) protein (126aa)
ATP synthase subunit C n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N594_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:CCY92362.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ntpK; cation exporting V-type ATPase, subunit K
L2_026_000M1_scaffold_162_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11957..13873)
DNA (1917bp) protein (639aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit domain protein n=3 Tax=root RepID=R5MLK0_9FIRM
V-type ATPase 116kDa subunit domain protein {ECO:0000313|EMBL:CCY92363.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L2_026_000M1_scaffold_162_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14086..15144)
DNA (1059bp) protein (353aa)
Putative ATP synthase subunit C n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWS7_9FIRM
Putative ATP synthase subunit C {ECO:0000313|EMBL:CDB41480.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
H+transporting two-sector ATPase C (AC39) subunit
L2_026_000M1_scaffold_162_13
unknown

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comp(15141..15473)
DNA (333bp) protein (111aa)

This feature has no annotations

L2_026_000M1_scaffold_162_14
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15703..16176)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7AFW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD57245.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein
L2_026_000M1_scaffold_162_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16479..17183
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76006.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted membrane protein
L2_026_000M1_scaffold_162_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17538..19904)
DNA (2367bp) protein (789aa)
E1-E2 ATPase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN72_9FIRM
E1-E2 ATPase {ECO:0000313|EMBL:EFB76007.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L2_026_000M1_scaffold_162_17
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(20311..20781)
DNA (471bp) protein (157aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEK4_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CCY23302.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
transcriptional regulator, MarR family
L2_026_000M1_scaffold_162_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20783..21904)
DNA (1122bp) protein (374aa)
Peptide chain release factor 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN73_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
bacterial peptide chain release factor 2 (bRF-2)
L2_026_000M1_scaffold_162_19
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22344..23369
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27511.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Protein of unknown function (DUF2628).
L2_026_000M1_scaffold_162_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23499..24428
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76011.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
GalU; UDP-glucose pyrophosphorylase
L2_026_000M1_scaffold_162_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24607..26190
DNA (1584bp) protein (528aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative UTP--hexose-1-phosphate uridylyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN78_9FIRM
galactose-1-phosphate uridylyltransferase
L2_026_000M1_scaffold_162_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26560..27876)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76254.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_162_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28011..28271)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76255.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcriptional regulator
L2_026_000M1_scaffold_162_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28284..28739)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76256.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_162_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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28956..30704
DNA (1749bp) protein (583aa)
Repeat protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG1_9FIRM
Repeat protein {ECO:0000313|EMBL:EFB76819.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_162_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30808..32580
DNA (1773bp) protein (591aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76820.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type multidrug transport system, ATPase and permease components
L2_026_000M1_scaffold_162_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32691..34007)
DNA (1317bp) protein (439aa)
Polysaccharide biosynthesis protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG3_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFB76821.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_026_000M1_scaffold_162_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34192..35016
DNA (825bp) protein (275aa)
Nucleotide-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG5_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:EFB76823.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPases involved in chromosome partitioning
L2_026_000M1_scaffold_162_29
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

35056..35478
DNA (423bp) protein (141aa)
Large conductance mechanosensitive channel protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D8H6_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
mscL; Large-conductance mechanosensitive channel
L2_026_000M1_scaffold_162_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36031..40581
DNA (4551bp) protein (1517aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Class II glutamine amidotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLG6_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:EFB76824.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying items 1-30 of 89 in total

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