ggKbase home page

L2_026_000M1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_182_1
unknown

Not on your lists

comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

L2_026_000M1_scaffold_182_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

140..6091
DNA (5952bp) protein (1984aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UNE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72646.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Protein of unknown function (DUF3320).
L2_026_000M1_scaffold_182_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6088..7218)
DNA (1131bp) protein (377aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3R1_9BACE
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:CCZ72645.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_026_000M1_scaffold_182_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7421..9532)
DNA (2112bp) protein (704aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72644.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_182_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9969..12158
DNA (2190bp) protein (730aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=3 Tax=Bacteroides RepID=A5ZGD0_9BACE
Glutamine synthetase {ECO:0000313|EMBL:CCZ72643.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_026_000M1_scaffold_182_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12290..12976
DNA (687bp) protein (229aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bacteroides RepID=A5ZGC9_9BACE
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDM21239.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_026_000M1_scaffold_182_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13012..13566
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor, expansion family 1 n=3 Tax=Bacteroides RepID=I9EQE5_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72641.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase subunit sigma-70
L2_026_000M1_scaffold_182_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13576..14790
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72640.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Fe2+-dicitrate sensor, membrane component
L2_026_000M1_scaffold_182_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14817..18386
DNA (3570bp) protein (1190aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAJ5_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ72639.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Outer membrane receptor proteins, mostly Fe transport
L2_026_000M1_scaffold_182_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18398..19954
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3G0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72638.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
SusD family.
L2_026_000M1_scaffold_182_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19991..21034
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22555.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_182_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21073..22086
DNA (1014bp) protein (338aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDM21233.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDM21233.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Antioxidant, AhpC/TSA family n=2 Tax=Bacteroides RepID=A5ZGC3_9BACE
Peroxiredoxin
L2_026_000M1_scaffold_182_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22120..23835
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U3Q3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72635.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Subtilisin-like serine proteases
L2_026_000M1_scaffold_182_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23837..25003
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAJ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72634.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_182_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25017..26312
DNA (1296bp) protein (432aa)
Thioredoxin n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0E7_9BACE
Thioredoxin {ECO:0000313|EMBL:EIY22551.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Thioredoxin domain-containing protein
L2_026_000M1_scaffold_182_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27046..27996)
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=3 Tax=Bacteroides RepID=A5ZGB8_9BACE
L2_026_000M1_scaffold_182_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28036..28683)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQD5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22549.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_182_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28703..31201)
DNA (2499bp) protein (833aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q138_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22548.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L2_026_000M1_scaffold_182_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31326..31991
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21225.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_026_000M1_scaffold_182_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31994..32638
DNA (645bp) protein (215aa)
3'-5' exonuclease {ECO:0000313|EMBL:EDM21224.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDM21224.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3'-5' exonuclease n=3 Tax=Bacteroides RepID=A5ZGB4_9BACE
hypothetical protein
L2_026_000M1_scaffold_182_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32645..33823
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZGB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72627.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_182_22
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33965..34201
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:564 RepID=R5M7E8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY87478.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
L2_026_000M1_scaffold_182_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34230..35480
DNA (1251bp) protein (417aa)
Nucleoside transporter n=3 Tax=Bacteroides RepID=A5ZGB1_9BACE
Nucleoside transporter {ECO:0000313|EMBL:EIY22544.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
xanthosine permease
L2_026_000M1_scaffold_182_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35491..36093
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21220.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_026_000M1_scaffold_182_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36101..36802
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA small subunit methyltransferase E n=3 Tax=root RepID=A5ZGA9_9BACE
16S ribosomal RNA methyltransferase RsmE
L2_026_000M1_scaffold_182_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36848..38395
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGA8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21218.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L2_026_000M1_scaffold_182_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38412..39056
DNA (645bp) protein (215aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGA7_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM21217.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ABC transporter ATP-binding protein
L2_026_000M1_scaffold_182_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39110..40315
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22539.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_182_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40337..42985
DNA (2649bp) protein (883aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22538.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent Receptor Plug Domain.
L2_026_000M1_scaffold_182_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43101..47141
DNA (4041bp) protein (1347aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22537.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
Displaying items 1-30 of 53 in total

View Taxonomy