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L2_026_000M1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_200_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKF2_9BACT
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 {ECO:0000313|EMBL:CBK63414.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(521..823)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKF1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63413.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(842..1348)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKF0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63412.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1353..1793)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63411.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1813..2214)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63410.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_6
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2231..2593)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63409.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2583..2822)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63408.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_8
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2865..2954)
DNA (90bp) protein (30aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003695ADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63407.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3148..4128)
DNA (981bp) protein (327aa)
Antirestriction protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE4_9BACT
Antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:CBK63406.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4139..4387)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63405.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4972..6054)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036391EC
Uncharacterized protein {ECO:0000313|EMBL:EYA21923.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
L2_026_000M1_scaffold_200_12
unknown

Not on your lists

7178..7714
DNA (537bp) protein (179aa)

This feature has no annotations

L2_026_000M1_scaffold_200_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7776..8120)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKE0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63402.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_14
unknown

Not on your lists

8141..8608
DNA (468bp) protein (156aa)

This feature has no annotations

L2_026_000M1_scaffold_200_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8420..9478)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003768155
Uncharacterized protein {ECO:0000313|EMBL:EIY62697.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L2_026_000M1_scaffold_200_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9468..9806)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKD8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63400.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9906..10265)
DNA (360bp) protein (120aa)
RteC protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKD7_9BACT
RteC protein.
RteC protein {ECO:0000313|EMBL:CBK63399.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_026_000M1_scaffold_200_18
unknown

Not on your lists

11347..11475
DNA (129bp) protein (43aa)

This feature has no annotations

L2_026_000M1_scaffold_200_19
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11633..12691
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Tannerella RepID=R7DFR3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL82238.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
Beta-xylosidase
L2_026_000M1_scaffold_200_20
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12715..13872
DNA (1158bp) protein (386aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Alistipes sp. CAG:268 RepID=R6VM81_9BACT
L2_026_000M1_scaffold_200_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14133..15551)
DNA (1419bp) protein (473aa)
Domain of unknown function (DUF303). (EC:3.1.1.53)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036D9A51
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:CDD24279.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_026_000M1_scaffold_200_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15570..17537)
DNA (1968bp) protein (656aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037EBEB7
Fibrobacter succinogenes major domain (Fib_succ_major).
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EFR58954.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_026_000M1_scaffold_200_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17549..19918)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB00_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49193.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
L2_026_000M1_scaffold_200_24
unknown

Not on your lists

comp(19930..20580)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036AB81F
L2_026_000M1_scaffold_200_25
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20600..22222)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000375D012
ragb/susd domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ADQ17572.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
L2_026_000M1_scaffold_200_26
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22235..25312)
DNA (3078bp) protein (1026aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F4AE0
Contig5, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78917.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
TonB-dependent receptor
L2_026_000M1_scaffold_200_27
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25349..26383)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036015C8
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CCX51580.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
inosine/uridine-preferring nucleoside hydrolase
L2_026_000M1_scaffold_200_28
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26419..27423)
DNA (1005bp) protein (335aa)
multidrug DMT transporter permease n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003174FDA
Putative membrane protein {ECO:0000313|EMBL:CCZ97166.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_026_000M1_scaffold_200_29
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27460..28368)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E59BA5
Ribokinase {ECO:0000313|EMBL:CCZ76860.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
ribokinase
L2_026_000M1_scaffold_200_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28423..29346)
DNA (924bp) protein (308aa)
Putative dihydrodipicolinate synthase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UDG9_9BACT
Putative dihydrodipicolinate synthase {ECO:0000313|EMBL:EFR57493.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
dihydrodipicolinate synthase
Displaying items 1-30 of 70 in total

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