ggKbase home page

L2_026_000M1_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_208_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

260..634
DNA (375bp) protein (125aa)
Repressor protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIY2_9FIRM
Repressor protein {ECO:0000313|EMBL:CDD77702.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phage repressor protein
L2_026_000M1_scaffold_208_2
unknown

Not on your lists

comp(597..734)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_026_000M1_scaffold_208_3
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

859..1752
DNA (894bp) protein (298aa)
SWIM zinc finger domain protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG58_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHN24266.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
L2_026_000M1_scaffold_208_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1774..3378
DNA (1605bp) protein (535aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2S7_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK97820.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_026_000M1_scaffold_208_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3502..4905)
DNA (1404bp) protein (468aa)
Serine/threonine transporter SstT n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1A3_9FIRM
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Na+/serine symporter
L2_026_000M1_scaffold_208_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5520..6299
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76802.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_208_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6451..7515
DNA (1065bp) protein (355aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB75767.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type multidrug transport system, ATPase component
L2_026_000M1_scaffold_208_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7499..8362
DNA (864bp) protein (288aa)
ABC-2 type transporter n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI1_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EFB75766.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_208_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8376..9800
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75765.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type uncharacterized transport system.
L2_026_000M1_scaffold_208_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9810..10820
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75764.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_208_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11129..12304
DNA (1176bp) protein (392aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH8_9FIRM
family 3 glycosyl hydrolase
L2_026_000M1_scaffold_208_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12358..13410
DNA (1053bp) protein (351aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB75762.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75762.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH7_9FIRM
group 1 glycosyl transferase
L2_026_000M1_scaffold_208_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13454..14980)
DNA (1527bp) protein (509aa)
Mg chelatase-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH6_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:EFB75761.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Mg chelatase-related protein
L2_026_000M1_scaffold_208_14
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14993..15802)
DNA (810bp) protein (270aa)
VanW family protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H568_9FIRM
VanW family protein {ECO:0000313|EMBL:CDE34138.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
van Willebrand factor A
L2_026_000M1_scaffold_208_15
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15812..16339)
DNA (528bp) protein (176aa)
HAD phosphatase family IIIA n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H4A7_9FIRM
HAD phosphatase family IIIA {ECO:0000313|EMBL:CDE34136.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
van Willebrand factor A
L2_026_000M1_scaffold_208_16
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16332..17009)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0Z6V5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83130.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
methylglyoxal synthase
L2_026_000M1_scaffold_208_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17226..18908
DNA (1683bp) protein (561aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMH5_9FIRM
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EFB75760.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_208_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19365..21371
DNA (2007bp) protein (669aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38416.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
antirepressor regulating drug resistance protein
L2_026_000M1_scaffold_208_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21386..21769
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38417.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative transcriptional regulator
L2_026_000M1_scaffold_208_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22012..22878
DNA (867bp) protein (289aa)
PHP domain protein {ECO:0000313|EMBL:EFB76772.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFB76772.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PHP domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB4_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
L2_026_000M1_scaffold_208_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22891..23148
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76771.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_208_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23277..25055
DNA (1779bp) protein (593aa)
FkbH domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB2_9FIRM
FkbH domain protein {ECO:0000313|EMBL:EFB76770.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
L2_026_000M1_scaffold_208_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25071..26183
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76769.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_208_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26199..27563
DNA (1365bp) protein (455aa)
MBOAT family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLB0_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EFB76768.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
alginate O-acetyltransferase
L2_026_000M1_scaffold_208_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27718..28677)
DNA (960bp) protein (320aa)
DNA replication protein DnaC n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:EFB76317.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA replication protein
L2_026_000M1_scaffold_208_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28681..29586)
DNA (906bp) protein (302aa)
DnaD domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL8_9FIRM
DnaD domain protein {ECO:0000313|EMBL:EFB76316.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Replication initiation and membrane attachment protein (DnaB).
L2_026_000M1_scaffold_208_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29771..30409
DNA (639bp) protein (213aa)
Phosphoribosyl transferase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLL7_9FIRM
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EFB76315.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_208_28
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30525..31622
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AU76_EUBCE
Uncharacterized protein {ECO:0000313|EMBL:EIM57349.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
L2_026_000M1_scaffold_208_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31984..32532
DNA (549bp) protein (183aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EFB75838.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFB75838.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RNA methyltransferase, RsmD family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ3_9FIRM
RNA methyltransferase, RsmD family
L2_026_000M1_scaffold_208_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32529..33002
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75837.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying items 1-30 of 67 in total

View Taxonomy