ggKbase home page

L2_026_000M1_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_237_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..81
DNA (81bp) protein (27aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Alistipes RepID=I3YR55_ALIFI
NodT family efflux transporter outer membrane lipoprotein
Efflux transporter outer membrane factor lipoprotein NodT family {ECO:0000313|EMBL:CCZ76816.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_237_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

81..662
DNA (582bp) protein (194aa)
Transcriptional regulator n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YR56_ALIFI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFL79474.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_237_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(815..2998)
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57095.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_026_000M1_scaffold_237_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3208..3309
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YR58_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79476.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_237_5
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3386..4669
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCY1_9BACT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EFR57195.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_026_000M1_scaffold_237_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4669..5685
DNA (1017bp) protein (339aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCY2_9BACT
L2_026_000M1_scaffold_237_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5704..6906
DNA (1203bp) protein (401aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCY3_9BACT
L2_026_000M1_scaffold_237_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7010..8350)
DNA (1341bp) protein (447aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCY4_9BACT
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EFR57225.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_026_000M1_scaffold_237_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8423..9625)
DNA (1203bp) protein (401aa)
Arabinose efflux permease family protein n=3 Tax=Alistipes RepID=I3YR63_ALIFI
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:CCZ76824.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_237_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9723..11189)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MCY6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57200.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_026_000M1_scaffold_237_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11345..12121
DNA (777bp) protein (259aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I3YR65_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79483.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_237_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12362..13639)
DNA (1278bp) protein (426aa)
IgA Peptidase M64 n=2 Tax=Bacteroidales RepID=R5NHP1_9BACT
IgA Peptidase M64 {ECO:0000313|EMBL:CCZ76827.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
IgA Peptidase M64
L2_026_000M1_scaffold_237_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13710..14681)
DNA (972bp) protein (324aa)
UPF0365 protein Alfi_3257 n=4 Tax=Bacteroidales RepID=I3YR67_ALIFI
hypothetical protein
UPF0365 protein HMPREF9720_1226 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_026_000M1_scaffold_237_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14694..15164)
DNA (471bp) protein (157aa)
Membrane-bound serine protease (ClpP class) n=4 Tax=Bacteroidales RepID=I3YR68_ALIFI
Nodulation efficiency protein D {ECO:0000313|EMBL:EFR57215.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
membrane-bound serine protease
L2_026_000M1_scaffold_237_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15210..16760)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=I3YR69_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76830.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_237_16
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16766..18211)
DNA (1446bp) protein (482aa)
Trk-type K+ transport system, membrane component n=3 Tax=Bacteroidales RepID=I3YR70_ALIFI
Trk-type K+ transport system, membrane component
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:AFL79488.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_237_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18217..18987)
DNA (771bp) protein (257aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I3YR71_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76832.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_237_18
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19032..20330)
DNA (1299bp) protein (433aa)
MiaB-like tRNA modifying enzyme n=2 Tax=Bacteroidales RepID=R5NCX7_9BACT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CCZ76833.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
MiaB-like tRNA modifying enzyme
L2_026_000M1_scaffold_237_19
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20433..21266
DNA (834bp) protein (278aa)
ABC-type Mn2+/Zn2+ transport system, permease component n=4 Tax=Bacteroidales RepID=I3YR73_ALIFI
Mn2+/Zn2+ ABC transporter permease
ABC-type Mn2+/Zn2+ transport system permease component {ECO:0000313|EMBL:CCZ01567.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
L2_026_000M1_scaffold_237_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21263..22765
DNA (1503bp) protein (501aa)
Putative permease n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YR74_ALIFI
permease
Putative permease {ECO:0000313|EMBL:CCZ76835.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_026_000M1_scaffold_237_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22740..23963
DNA (1224bp) protein (408aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Alistipes sp. HGB5 RepID=E4MCZ7_9BACT
3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_026_000M1_scaffold_237_22
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24021..24992
DNA (972bp) protein (324aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Methionyl-tRNA formyltransferase n=1 Tax=Alistipes sp. HGB5 RepID=E4MCZ8_9BACT
methionyl-tRNA formyltransferase
L2_026_000M1_scaffold_237_23
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25055..25759)
DNA (705bp) protein (235aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFR57096.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFR57096.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Antioxidant, AhpC/TSA family n=1 Tax=Alistipes sp. HGB5 RepID=E4MCZ9_9BACT
peroxiredoxin
L2_026_000M1_scaffold_237_24
unknown

Not on your lists

comp(25863..25994)
DNA (132bp) protein (44aa)

This feature has no annotations

L2_026_000M1_scaffold_237_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26009..26554)
DNA (546bp) protein (182aa)
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit n=2 Tax=root RepID=E4MD00_9BACT
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:EFR57232.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
2-oxoacid:ferredoxin oxidoreductase subunit gamma
L2_026_000M1_scaffold_237_26
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26565..27326)
DNA (762bp) protein (254aa)
2-oxoacid:ferredoxin oxidoreductase, beta subunit n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YR80_ALIFI
2-oxoacid:ferredoxin oxidoreductase subunit beta
2-oxoacid:ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:AFL79498.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_026_000M1_scaffold_237_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27332..28426)
DNA (1095bp) protein (365aa)
3-methyl-2-oxobutanoate dehydrogenase (Ferredoxin) {ECO:0000313|EMBL:EFR57222.1}; EC=1.2.7.7 {ECO:0000313|EMBL:EFR57222.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
3-methyl-2-oxobutanoate dehydrogenase (Ferredoxin) n=1 Tax=Alistipes sp. HGB5 RepID=E4MD02_9BACT
2-oxoacid:ferredoxin oxidoreductase subunit alpha
L2_026_000M1_scaffold_237_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28430..28657)
DNA (228bp) protein (76aa)
Ferredoxin n=3 Tax=Alistipes RepID=I3YR82_ALIFI
ferredoxin
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFR57187.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_026_000M1_scaffold_237_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28998..30242)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MD05_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR57175.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_026_000M1_scaffold_237_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30267..31190)
DNA (924bp) protein (308aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=3 Tax=Alistipes RepID=I3YR84_ALIFI
phosphoglycerate dehydrogenase-like oxidoreductase
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AFL79502.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 61 in total

View Taxonomy