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L2_026_000M1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_293_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(701..1408)
DNA (708bp) protein (236aa)
Pirin family protein n=2 Tax=Parabacteroides merdae RepID=A7ABW9_9PORP
Pirin family protein {ECO:0000313|EMBL:EDN87752.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_293_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1628..3121
DNA (1494bp) protein (498aa)
inosine 5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Parabacteroides RepID=K6A3P0_9PORP
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EKN10263.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_026_000M1_scaffold_293_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3201..3512)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A5A6_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN87750.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L2_026_000M1_scaffold_293_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3509..6022)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZHD1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10851.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_293_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6623..7618)
DNA (996bp) protein (332aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BL44_9PORP
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDD14122.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
endo-1,4-beta-xylanase
L2_026_000M1_scaffold_293_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7635..8699)
DNA (1065bp) protein (355aa)
Arabinan endo-1,5-alpha-L-arabinosidase n=2 Tax=Parabacteroides merdae RepID=A7ABW3_9PORP
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDN87746.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_293_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8786..10627)
DNA (1842bp) protein (614aa)
SusD family protein n=2 Tax=Parabacteroides merdae RepID=A7ABW2_9PORP
SusD family protein {ECO:0000313|EMBL:EDN87745.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
SusD family.
L2_026_000M1_scaffold_293_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10647..14156)
DNA (3510bp) protein (1170aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7ABW1_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN87744.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
L2_026_000M1_scaffold_293_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14383..15408)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZHC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10846.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative anti sigma factor
L2_026_000M1_scaffold_293_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15535..16119)
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor n=4 Tax=Parabacteroides RepID=A7ABV9_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD14117.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase ECF-type sigma factor
L2_026_000M1_scaffold_293_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16272..16625
DNA (354bp) protein (118aa)
Thioredoxin n=4 Tax=Parabacteroides RepID=A7ABV7_9PORP
Thioredoxin {ECO:0000313|EMBL:EKN10844.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
thioredoxin
L2_026_000M1_scaffold_293_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16677..20165)
DNA (3489bp) protein (1163aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A596_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10843.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_026_000M1_scaffold_293_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20195..20860)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZPB6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13351.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_026_000M1_scaffold_293_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20961..21203
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7ABV4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14114.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_026_000M1_scaffold_293_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21194..21475
DNA (282bp) protein (94aa)
Plasmid stabilization system protein, RelE/ParE family n=3 Tax=Parabacteroides RepID=A7ABV3_9PORP
Plasmid stabilization system protein, RelE/ParE family {ECO:0000313|EMBL:EDN87736.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_293_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21632..22654
DNA (1023bp) protein (341aa)
PhoH family protein n=4 Tax=Parabacteroides RepID=A7ABV2_9PORP
PhoH family protein {ECO:0000313|EMBL:CDD14112.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphate starvation-inducible protein PhoH
L2_026_000M1_scaffold_293_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22676..23623
DNA (948bp) protein (316aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=4 Tax=Parabacteroides RepID=A7ABV1_9PORP
L2_026_000M1_scaffold_293_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23635..24402
DNA (768bp) protein (256aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Demethylmenaquinone methyltransferase n=2 Tax=Parabacteroides merdae RepID=A7ABV0_9PORP
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase
L2_026_000M1_scaffold_293_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24424..25164
DNA (741bp) protein (247aa)
Shikimate 5-dehydrogenase n=3 Tax=Parabacteroides merdae RepID=K5YBU1_9PORP
Putative shikimate dehydrogenase {ECO:0000313|EMBL:EDN87732.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
shikimate 5-dehydrogenase
L2_026_000M1_scaffold_293_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25251..25856)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ABU8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87731.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
siderophore biosynthesis regulatory protein
L2_026_000M1_scaffold_293_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25868..26443)
DNA (576bp) protein (192aa)
Gliding motility-associated lipoprotein GldD n=3 Tax=Parabacteroides RepID=K5ZPG7_9PORP
Putative gliding motility-associated lipoprotein GldD {ECO:0000313|EMBL:EDN87730.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_293_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26443..27783)
DNA (1341bp) protein (447aa)
Gliding motility-associated protein GldE n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCP4_9PORP
Gliding motility-associated protein GldE {ECO:0000313|EMBL:CDD14106.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hemolysin-like protein
L2_026_000M1_scaffold_293_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27809..28312)
DNA (504bp) protein (168aa)
Single-stranded DNA-binding protein n=3 Tax=Parabacteroides RepID=A7ABU5_9PORP
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ssDNA-binding protein
L2_026_000M1_scaffold_293_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28355..29584)
DNA (1230bp) protein (410aa)
A/G-specific adenine glycosylase n=2 Tax=Parabacteroides merdae RepID=A7ABU4_9PORP
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EDN87727.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
A/G-specific adenine glycosylase
L2_026_000M1_scaffold_293_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29633..29905
DNA (273bp) protein (91aa)
DNA-binding protein HU n=7 Tax=Parabacteroides RepID=A7ABU3_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:EDN87726.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA-binding protein HU
L2_026_000M1_scaffold_293_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30134..31714
DNA (1581bp) protein (527aa)
Rne/Rng family ribonuclease n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZHU9_9PORP
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EKN10830.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ribonuclease G
L2_026_000M1_scaffold_293_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31774..32790
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Z5K8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10829.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative endonuclease/exonuclease/phosphatase family protein
L2_026_000M1_scaffold_293_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32809..33375)
DNA (567bp) protein (189aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides merdae RepID=A7ABU0_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN87723.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_026_000M1_scaffold_293_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33505..33603)
DNA (99bp) protein (33aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7ABT9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87722.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_026_000M1_scaffold_293_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33810..34697
DNA (888bp) protein (296aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Parabacteroides merdae RepID=A7ABT7_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN87720.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-sigma factor
Displaying items 1-30 of 44 in total

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