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L2_026_000M1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_300_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..763
DNA (762bp) protein (254aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=3 Tax=Bacteroides RepID=A5ZFD5_9BACE
L2_026_000M1_scaffold_300_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

823..1272
DNA (450bp) protein (150aa)
Sporulation and cell division repeat protein n=3 Tax=Bacteroides RepID=A5ZFD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23349.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Sporulation related domain.
L2_026_000M1_scaffold_300_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1280..1873
DNA (594bp) protein (198aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=3 Tax=Bacteroides RepID=A5ZFD7_9BACE
L2_026_000M1_scaffold_300_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1993..4095)
DNA (2103bp) protein (701aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
DNA primase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFD8_9BACE
DNA primase
L2_026_000M1_scaffold_300_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4211..4984)
DNA (774bp) protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8VDE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71957.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_026_000M1_scaffold_300_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5190..6251)
DNA (1062bp) protein (354aa)
chorismate mutase (EC:2.5.1.54 5.4.99.5)
Putative 3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Bacteroides RepID=A5ZFE1_9BACE
Putative 3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDM20901.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_026_000M1_scaffold_300_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6256..7443)
DNA (1188bp) protein (396aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDM20902.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDM20902.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Aminotransferase, class I/II n=2 Tax=Bacteroides caccae RepID=A5ZFE2_9BACE
Aspartate/tyrosine/aromatic aminotransferase
L2_026_000M1_scaffold_300_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7418..8266)
DNA (849bp) protein (283aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=3 Tax=Bacteroides RepID=A5ZFE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71960.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_026_000M1_scaffold_300_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8608..9570)
DNA (963bp) protein (321aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides caccae RepID=A5ZFE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23356.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_300_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9612..11516)
DNA (1905bp) protein (635aa)
RecQ family ATP-dependent DNA helicase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDF0_9BACE
RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:EIY23357.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATP-dependent DNA helicase RecQ
L2_026_000M1_scaffold_300_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11509..13227)
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDM20906.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDM20906.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Single-stranded-DNA-specific exonuclease RecJ n=3 Tax=Bacteroides RepID=A5ZFE6_9BACE
single-stranded-DNA-specific exonuclease recJ
L2_026_000M1_scaffold_300_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13723..14157)
DNA (435bp) protein (145aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Bacteroides RepID=A5ZFE7_9BACE
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EIY23359.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_300_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14269..14799
DNA (531bp) protein (177aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Bacteroides RepID=A5ZFE8_9BACE
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EDM20908.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
translation factor SUA5
L2_026_000M1_scaffold_300_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14800..16593
DNA (1794bp) protein (598aa)
Chloride transporter, ClC family n=3 Tax=Bacteroides RepID=A5ZFE9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71966.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Chloride channel protein EriC
L2_026_000M1_scaffold_300_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16655..17623
DNA (969bp) protein (323aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=2 Tax=Bacteroides RepID=A5ZFF0_9BACE
L2_026_000M1_scaffold_300_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17688..18338
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=3 Tax=Bacteroides RepID=A5ZFG1_9BACE
L2_026_000M1_scaffold_300_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18345..20471
DNA (2127bp) protein (709aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9ESN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23364.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
competence protein
L2_026_000M1_scaffold_300_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20518..21555
DNA (1038bp) protein (346aa)
DHH family protein n=2 Tax=Bacteroides RepID=A5ZFG3_9BACE
DHH family protein {ECO:0000313|EMBL:CCZ71970.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Exopolyphosphatase-related proteins
L2_026_000M1_scaffold_300_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21674..22327
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5ULB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71971.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L2_026_000M1_scaffold_300_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22364..23755
DNA (1392bp) protein (464aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase n=4 Tax=root RepID=A5ZFG5_9BACE
Phosphoglucosamine mutase {ECO:0000313|EMBL:EIY23367.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000M1_scaffold_300_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23867..26245)
DNA (2379bp) protein (793aa)
TonB-dependent receptor n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UC02_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23368.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane receptor proteins, mostly Fe transport
L2_026_000M1_scaffold_300_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26435..27769
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23369.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_026_000M1_scaffold_300_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27789..28391)
DNA (603bp) protein (201aa)
Transcriptional regulator, LuxR family n=4 Tax=root RepID=A5ZFG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73131.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
LuxR family transcriptional regulator
L2_026_000M1_scaffold_300_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28398..30059)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=3 Tax=root RepID=A5ZFG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20929.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
NAD-utilizing dehydrogenase
L2_026_000M1_scaffold_300_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30117..31484)
DNA (1368bp) protein (456aa)
DNA repair protein radA n=3 Tax=Bacteroides RepID=A5ZFH0_9BACE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA repair protein RadA
L2_026_000M1_scaffold_300_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31705..32688)
DNA (984bp) protein (328aa)
asparaginase (EC:3.5.1.1)
Asparaginase n=2 Tax=Bacteroides RepID=R5UC07_9BACE
Asparaginase {ECO:0000313|EMBL:CCZ73134.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L2_026_000M1_scaffold_300_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33141..35582
DNA (2442bp) protein (814aa)
Homoserine dehydrogenase n=2 Tax=Bacteroides RepID=A5ZFH3_9BACE
Homoserine dehydrogenase {ECO:0000313|EMBL:CCZ73135.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I
L2_026_000M1_scaffold_300_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35589..36797
DNA (1209bp) protein (403aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=2 Tax=Bacteroides RepID=A5ZFH4_9BACE
Putative homoserine kinase {ECO:0000313|EMBL:EDM20934.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_026_000M1_scaffold_300_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36811..38112
DNA (1302bp) protein (434aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=3 Tax=Bacteroides RepID=A5ZFH5_9BACE
Threonine synthase {ECO:0000313|EMBL:EIY23376.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L2_026_000M1_scaffold_300_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38289..38915)
DNA (627bp) protein (209aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=3 Tax=Bacteroides RepID=A5ZFH6_9BACE
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCZ73138.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Displaying items 1-30 of 82 in total

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