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L2_026_000M1_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_301_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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109..3696
DNA (3588bp) protein (1196aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAR5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75570.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_301_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3708..4946
DNA (1239bp) protein (413aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6U3I0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94643.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_301_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4956..5735
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UVB0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC74637.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_301_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5886..7340
DNA (1455bp) protein (485aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TR41_9FIRM
L2_026_000M1_scaffold_301_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7362..9215
DNA (1854bp) protein (618aa)
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Superfamily I DNA and RNA helicases n=2 Tax=Eubacterium rectale RepID=D4JNH0_9FIRM
L2_026_000M1_scaffold_301_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9212..9523)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNG9_9FIRM
Protein of unknown function (DUF1292).
Uncharacterized protein {ECO:0000313|EMBL:CBK94638.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_301_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9647..11509
DNA (1863bp) protein (621aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Type II secretory pathway pullulanase PulA and related glycosidases n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U3I7_9FIRM
Type II secretory pathway pullulanase PulA and related glycosidases {ECO:0000313|EMBL:CDC74646.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_301_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11514..12116
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNG7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94636.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_301_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12093..13016)
DNA (924bp) protein (308aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Pseudouridine synthase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZAQ6_EUBR3
pseudouridine synthase
L2_026_000M1_scaffold_301_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13036..13671
DNA (636bp) protein (212aa)
RNA polymerase sigma factor n=2 Tax=Eubacterium rectale RepID=C4ZAQ5_EUBR3
RNA polymerase, sigma 27/28 subunit, RpsK/SigK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_301_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13762..15297
DNA (1536bp) protein (512aa)
Mg chelatase-related protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E503_9FIRM
Mg chelatase-related protein
Mg chelatase-related protein {ECO:0000313|EMBL:CBK90493.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_301_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15294..16373
DNA (1080bp) protein (360aa)
DNA protecting protein DprA n=2 Tax=Eubacterium rectale RepID=C4ZAQ3_EUBR3
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ACR75558.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_301_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16373..18457
DNA (2085bp) protein (695aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBK90491.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA topoisomerase 1 n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E501_9FIRM
L2_026_000M1_scaffold_301_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18464..19240
DNA (777bp) protein (259aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=4 Tax=Eubacterium RepID=C4ZAQ1_EUBR3
GTP-sensing transcriptional pleiotropic repressor CodY
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_301_15
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19545..20279
DNA (735bp) protein (245aa)
30S ribosomal protein S2 n=4 Tax=Eubacterium RepID=C4ZA78_EUBR3
SSU ribosomal protein S2P
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_026_000M1_scaffold_301_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20307..21392
DNA (1086bp) protein (362aa)
Elongation factor Ts n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGJ8_9FIRM
translation elongation factor Ts (EF-Ts)
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_026_000M1_scaffold_301_17
unknown

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21537..21629
DNA (93bp) protein (31aa)

This feature has no annotations

L2_026_000M1_scaffold_301_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21643..22338
DNA (696bp) protein (232aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Uridylate kinase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGJ5_9FIRM
L2_026_000M1_scaffold_301_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22372..22926
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=3 Tax=Eubacterium rectale RepID=RRF_EUBR3
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_301_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23081..23806
DNA (726bp) protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Isoprenyl transferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TRA6_9FIRM
UDP diphosphate synthase
L2_026_000M1_scaffold_301_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23806..24609
DNA (804bp) protein (268aa)
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Phosphatidate cytidylyltransferase n=3 Tax=Eubacterium RepID=C4ZA71_EUBR3
L2_026_000M1_scaffold_301_22
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24695..25837
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UVH7_9FIRM
L2_026_000M1_scaffold_301_23
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25840..26886
DNA (1047bp) protein (349aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Predicted membrane-associated Zn-dependent protease n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TMR1_9FIRM
putative membrane-associated Zn-dependent protease
L2_026_000M1_scaffold_301_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26913..27959
DNA (1047bp) protein (349aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGJ0_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_026_000M1_scaffold_301_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27962..32539
DNA (4578bp) protein (1526aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
DNA polymerase III polC-type n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA67_EUBR3
DNA polymerase III, alpha subunit
L2_026_000M1_scaffold_301_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32674..33252)
DNA (579bp) protein (193aa)
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Xanthine phosphoribosyltransferase n=3 Tax=Eubacterium RepID=XPT_EUBR3
L2_026_000M1_scaffold_301_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33294..33785)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4V7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90447.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_026_000M1_scaffold_301_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33832..34311
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Eubacterium RepID=C4ZA64_EUBR3
hypothetical protein
L2_026_000M1_scaffold_301_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34349..34609
DNA (261bp) protein (87aa)
YabP family n=4 Tax=Eubacterium RepID=D4JGI6_9FIRM
YabP family.
Uncharacterized protein {ECO:0000313|EMBL:ACR75504.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_026_000M1_scaffold_301_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34599..35126
DNA (528bp) protein (176aa)
Putative stage IV sporulation protein YqfD n=2 Tax=Eubacterium rectale RepID=D4JGI5_9FIRM
Putative stage IV sporulation protein YqfD.
Putative stage IV sporulation protein YqfD {ECO:0000313|EMBL:CBK90444.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying items 1-30 of 48 in total

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