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L2_026_000M1_scaffold_336

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_336_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..240)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF41179.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_026_000M1_scaffold_336_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(259..741)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74809.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_026_000M1_scaffold_336_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(738..1157)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71983.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_026_000M1_scaffold_336_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1154..1513)
DNA (360bp) protein (120aa)
Minor capsid n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ09_CELLD
Uncharacterized protein {ECO:0000313|EMBL:KJF41182.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Minor capsid
L2_026_000M1_scaffold_336_5
unknown

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comp(1513..1926)
DNA (414bp) protein (138aa)

This feature has no annotations

L2_026_000M1_scaffold_336_6
unknown

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comp(1986..2396)
DNA (411bp) protein (137aa)

This feature has no annotations

L2_026_000M1_scaffold_336_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2412..3158)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037A0A83
Putative coat protein {ECO:0000313|EMBL:EQK46902.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
prophage LambdaCh01, coat protein
L2_026_000M1_scaffold_336_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3146..3343)
DNA (198bp) protein (66aa)
DNA polymerase A family protein n=1 Tax=Clostridium difficile DA00134 RepID=T3N9M2_CLODI
dna-directed dna polymerase i
DNA-directed DNA polymerase {ECO:0000313|EMBL:EHJ25461.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_026_000M1_scaffold_336_9
Corynebacterium falsenii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3365..4123)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K599_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI04459.1}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 44353.;"
L2_026_000M1_scaffold_336_10
unknown

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comp(4120..4305)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_026_000M1_scaffold_336_11
unknown

Not on your lists

comp(4302..4613)
DNA (312bp) protein (104aa)

This feature has no annotations

L2_026_000M1_scaffold_336_12
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4613..5779)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KWI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEJ51873.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
Protein of unknown function (DUF2800).
L2_026_000M1_scaffold_336_13
unknown

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comp(5766..6197)
DNA (432bp) protein (144aa)

This feature has no annotations

L2_026_000M1_scaffold_336_14
unknown

Not on your lists

comp(6190..6411)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_026_000M1_scaffold_336_15
unknown

Not on your lists

comp(6404..6862)
DNA (459bp) protein (153aa)

This feature has no annotations

L2_026_000M1_scaffold_336_16
unknown

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comp(6862..7248)
DNA (387bp) protein (129aa)
growth inhibitor PemK n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B63745
L2_026_000M1_scaffold_336_17
unknown

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comp(7248..7472)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_026_000M1_scaffold_336_18
unknown

Not on your lists

comp(7447..7620)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_026_000M1_scaffold_336_19
unknown

Not on your lists

comp(7625..7840)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_026_000M1_scaffold_336_20
unknown

Not on your lists

comp(7856..8041)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_026_000M1_scaffold_336_21
unknown

Not on your lists

8457..8672
DNA (216bp) protein (72aa)

This feature has no annotations

L2_026_000M1_scaffold_336_22
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8889..9797
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KDG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44271.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L2_026_000M1_scaffold_336_23
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9815..10885
DNA (1071bp) protein (357aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DVL1_CLOS4
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERJ00971.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
putative integrase
L2_026_000M1_scaffold_336_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10959..11576
DNA (618bp) protein (206aa)
Regulatory protein RecX n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP62_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_336_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11800..13140
DNA (1341bp) protein (447aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP61_9FIRM
L2_026_000M1_scaffold_336_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13144..13719
DNA (576bp) protein (192aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EFB75556.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EFB75556.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP60_9FIRM
L2_026_000M1_scaffold_336_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13897..15792
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75555.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_026_000M1_scaffold_336_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15866..17263
DNA (1398bp) protein (466aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP58_9FIRM
L2_026_000M1_scaffold_336_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17283..20306
DNA (3024bp) protein (1008aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EFB75553.1}; EC=2.4.1.109 {ECO:0000313|EMBL:EFB75553.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP57_9FIRM
glycosyl transferase
L2_026_000M1_scaffold_336_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20482..21717)
DNA (1236bp) protein (412aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP56_9FIRM
Displaying items 1-30 of 59 in total

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