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L2_026_000M1_scaffold_351

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_026_000M1_scaffold_351_1
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84..251)
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=F3QH32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83439.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
6-pyruvoyl-tetrahydropterin synthase
L2_026_000M1_scaffold_351_2
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(293..685)
DNA (393bp) protein (131aa)
Transcriptional regulator Fur family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVM7_9PROT
Transcriptional regulator Fur family {ECO:0000313|EMBL:CDA42820.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ferric uptake regulator
L2_026_000M1_scaffold_351_3
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(841..1800)
DNA (960bp) protein (320aa)
Tat pathway signal sequence domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y395_9BURK
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFL83441.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_026_000M1_scaffold_351_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

1990..2895
DNA (906bp) protein (302aa)
LysR substrate binding domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ANY1_9PROT
LysR substrate binding domain protein {ECO:0000313|EMBL:CDA42822.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
LysR family transcriptional regulator
L2_026_000M1_scaffold_351_5
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

2992..6438
DNA (3447bp) protein (1149aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
DNA polymerase III alpha subunit n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTS6_9PROT
DNA polymerase III subunit alpha
L2_026_000M1_scaffold_351_6
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

6633..8672
DNA (2040bp) protein (680aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A245_9PROT
Cell division protein FtsH
L2_026_000M1_scaffold_351_7
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

8834..9409
DNA (576bp) protein (192aa)
Transcription elongation factor GreB n=3 Tax=Proteobacteria RepID=D9Y399_9BURK
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
putative transcription elongation factor
L2_026_000M1_scaffold_351_8
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9442..10506
DNA (1065bp) protein (355aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QH25_9BURK
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_026_000M1_scaffold_351_9
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10503..11636
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Proteobacteria RepID=F3QH24_9BURK
L2_026_000M1_scaffold_351_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

11912..12262
DNA (351bp) protein (117aa)
Preprotein translocase YajC subunit n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTU2_9PROT
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDA42838.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
preprotein translocase subunit YajC
L2_026_000M1_scaffold_351_11
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

12397..14265
DNA (1869bp) protein (623aa)
Protein translocase subunit SecD n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A259_9PROT
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
secD; preprotein translocase subunit SecD
L2_026_000M1_scaffold_351_12
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

14268..15203
DNA (936bp) protein (312aa)
Protein-export membrane protein SecF n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVP7_9PROT
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
protein-export membrane protein SecF
L2_026_000M1_scaffold_351_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

15335..15892
DNA (558bp) protein (186aa)
Putative membrane protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AP03_9PROT
Putative membrane protein {ECO:0000313|EMBL:CDA42842.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
membrane protein
L2_026_000M1_scaffold_351_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

15855..16187
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A264_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42844.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
OmpA/MotB domain-containing protein
L2_026_000M1_scaffold_351_15
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16268..16930)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=4 Tax=Proteobacteria RepID=D9Y3A7_9BURK
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX88211.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
transcriptional regulator, LuxR family
L2_026_000M1_scaffold_351_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(17013..18062)
DNA (1050bp) protein (350aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AP07_9PROT
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CDA42847.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hupE_[H]; [NiFe] hydrogenase metallocenter assembly protein HypE
L2_026_000M1_scaffold_351_17
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(18080..19186)
DNA (1107bp) protein (369aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTV3_9PROT
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:CDA42848.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hydrogenase formation protein HypD
L2_026_000M1_scaffold_351_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(19183..19416)
DNA (234bp) protein (78aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A269_9PROT
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:CDA42849.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypC; hydrogenase assembly chaperone HypC/HupF
L2_026_000M1_scaffold_351_19
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(19422..21740)
DNA (2319bp) protein (773aa)
Carbamoyltransferase HypF n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVQ9_9PROT
Carbamoyltransferase HypF {ECO:0000313|EMBL:CDA42850.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
carbamoyltransferase
L2_026_000M1_scaffold_351_20
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(21795..22469)
DNA (675bp) protein (225aa)
Hydrogenase accessory protein HypB n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A882_9PROT
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:CDA42851.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
Hydrogenase nickel incorporation protein
L2_026_000M1_scaffold_351_21
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(22541..22723)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AP13_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA42852.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hydrogenase accessory protein HypB
L2_026_000M1_scaffold_351_22
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(22747..23094)
DNA (348bp) protein (116aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZTV9_9PROT
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypA1; hydrogenase nickel incorporation protein HypA
L2_026_000M1_scaffold_351_23
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(23087..24181)
DNA (1095bp) protein (365aa)
Conserved domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A273_9PROT
Conserved domain protein {ECO:0000313|EMBL:CDA42854.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
putative hydrogenase expression/formation protein HupK
L2_026_000M1_scaffold_351_24
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(24178..24651)
DNA (474bp) protein (158aa)
[NiFe] hydrogenase assembly chaperone HybE family n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVR5_9PROT
[NiFe] hydrogenase assembly chaperone HybE family {ECO:0000313|EMBL:CDA42855.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L2_026_000M1_scaffold_351_25
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(24734..24994)
DNA (261bp) protein (87aa)
Rubredoxin n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A888_9PROT
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
rubredoxin-type Fe(Cys)4 protein
L2_026_000M1_scaffold_351_26
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(24994..25899)
DNA (906bp) protein (302aa)
HupH hydrogenase expression protein conserved region n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AP17_9PROT
HupH hydrogenase expression protein conserved region {ECO:0000313|EMBL:CDA42857.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
HupH hydrogenase expression protein
L2_026_000M1_scaffold_351_27
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25923..26369)
DNA (447bp) protein (149aa)
Hydrogenase expression/formation protein n=2 Tax=Proteobacteria RepID=D9Y3B8_9BURK
Hydrogenase expression/formation protein {ECO:0000256|PIRNR:PIRNR038934}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hydrogenase-1 expression HyaE
L2_026_000M1_scaffold_351_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26369..26677)
DNA (309bp) protein (103aa)
HupF/HypC family protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3B9_9BURK
HupF/HypC family protein {ECO:0000313|EMBL:EFL83465.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_026_000M1_scaffold_351_29
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(26695..27336)
DNA (642bp) protein (214aa)
hupD; hydrogenase expression/formation protein hupD (EC:3.4.24.-)
Hydrogenase expression/formation protein HoxM n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZVR9_9PROT
Hydrogenase expression/formation protein HoxM {ECO:0000313|EMBL:CDA42860.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L2_026_000M1_scaffold_351_30
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27484..27831)
DNA (348bp) protein (116aa)
Addiction module antidote protein HigA n=3 Tax=Burkholderiales RepID=D9Y3C1_9BURK
Addiction module antidote protein HigA {ECO:0000313|EMBL:CCX88226.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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